RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 SYAP1Q96A49 352 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 SPATA32Q96LK8 384 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 FOXP1Q9H334 677 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 DNAJC18Q9H819 358 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 VEZTQ9HBM0 779 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 BRMS1Q9HCU9 246 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 NYAP2Q9P242 653 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 CNOT7Q9UIV1 285 aaKnown RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 SYNPO2Q9UMS6 1093 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 V9GY48 417 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 GOLGA6L4A6NEF3 574 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 hCG_1984214I3L0E3 225 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 SCG2P13521 617 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 U2AF2P26368 475 aaKnown RBP eCLIP7.11□□□□□ -1.27
VAMP3-203ENST00000487194 GUCY1A2P33402 732 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 PRELPP51888 382 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 GSE1Q14687 1217 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 PFKFB3Q16875 520 aaPredicted RBP7.11□□□□□ -1.27
VAMP3-203ENST00000487194 ABCB5Q2M3G0 1257 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 GPATCH4Q5T3I0 446 aaKnown RBP7.11□□□□□ -1.27
VAMP3-203ENST00000487194 OTUD7BQ6GQQ9 843 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
VAMP3-203ENST00000487194 ZNF713Q8N859 430 aaPredicted RBP7.11□□□□□ -1.27
VAMP3-203ENST00000487194 HOOK2Q96ED9 719 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 AIFM3Q96NN9 605 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 SPZ1Q9BXG8 430 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.11□□□□□ -1.27
VAMP3-203ENST00000487194 GDPD2Q9HCC8 539 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 SH3GLB2Q9NR46 395 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 GINM1Q9NU53 330 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 CLIP2Q9UDT6 1046 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 MAD2L2Q9UI95 211 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 RCOR1Q9UKL0 485 aa7.11□□□□□ -1.27
VAMP3-203ENST00000487194 CNTNAP1P78357 1384 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 ZNF541Q9H0D2 1346 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 GOLGB1Q14789 3259 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 GREB1LQ9C091 1923 aaPredicted RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 DICER1Q9UPY3 1922 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 KLRF2D3W0D1 207 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 YEATS4O95619 227 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 SNHG28P0DPA3 235 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 PDHBP11177 359 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 CALML3P27482 149 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 KRT2P35908 639 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 MAP3K10Q02779 954 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 ICA1Q05084 483 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 RASA3Q14644 834 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 PKN1Q16512 942 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 KIF4BQ2VIQ3 1234 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 MYSM1Q5VVJ2 828 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 GALNT17Q6IS24 598 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 FAM173BQ6P4H8 233 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 APOBEC3FQ8IUX4 373 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 NOSTRINQ8IVI9 506 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 DIS3L2Q8IYB7 885 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 CCDC148Q8NFR7 591 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 GPT2Q8TD30 523 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 KCNG4Q8TDN1 519 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 CCDC12Q8WUD4 166 aaPredicted RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 DCAF4Q8WV16 495 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 LEO1Q8WVC0 666 aaPredicted RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 RRP36Q96EU6 259 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 CHAMP1Q96JM3 812 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 PHF20Q9BVI0 1012 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 POLR3EQ9NVU0 708 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 RTEL1Q9NZ71 1219 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 SEC63Q9UGP8 760 aaKnown RBP7.1□□□□□ -1.27
VAMP3-203ENST00000487194 SIPA1L1O43166 1804 aa7.1□□□□□ -1.27
VAMP3-203ENST00000487194 MYH6P13533 1939 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 TCHHQ07283 1943 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 FAM196BA6NMK8 535 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 USP17L5A8MUK1 530 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 KIF28PB7ZC32 967 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 GADD45BO75293 160 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 GH2P01242 217 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 EEF2P13639 858 aaKnown RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 LMOD1P29536 600 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 NASPP49321 788 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 NLRP5P59047 1200 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 ATP2B2Q01814 1243 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 ZNF543Q08ER8 600 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 SEPT2Q15019 361 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 STK38Q15208 465 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 TBC1D10BQ4KMP7 808 aaPredicted RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 RILPL1Q5EBL4 403 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 USP17L2Q6R6M4 530 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 SAMD7Q7Z3H4 446 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 LRRC47Q8N1G4 583 aaKnown RBP7.09□□□□□ -1.27
VAMP3-203ENST00000487194 STAG2Q8N3U4 1231 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 JMYQ8N9B5 988 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 GMCL1P1Q8NEA9 526 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 USP28Q96RU2 1077 aa7.09□□□□□ -1.27
VAMP3-203ENST00000487194 TMEM39BQ9GZU3 492 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms