RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 STK38Q15208 465 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 VPS72Q15906 364 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
USP16-206ENST00000485067 TBC1D10CQ8IV04 446 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 KRT23Q9C075 422 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 IQCGQ9H095 443 aaKnown RBP10.49□□□□□ -0.73
USP16-206ENST00000485067 DNAJC25Q9H1X3 360 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 GOLPH3LQ9H4A5 285 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 PCDHA7Q9UN72 937 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 ZNF652Q9Y2D9 606 aa10.49□□□□□ -0.73
USP16-206ENST00000485067 CASZ1Q86V15 1759 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 ZNF75DP51815 510 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 TERF2Q15554 542 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 MYSM1Q5VVJ2 828 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 TAX1BP1Q86VP1 789 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 FMR1NBQ8N0W7 255 aaPredicted RBP10.48□□□□□ -0.73
USP16-206ENST00000485067 SAMD3Q8N6K7 520 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 KIAA1524Q8TCG1 905 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 SMARCC1Q92922 1105 aaPredicted RBP10.48□□□□□ -0.73
USP16-206ENST00000485067 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 TRIM5Q9C035 493 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 FTOQ9C0B1 505 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP16-206ENST00000485067 BLOC1S6Q9UL45 172 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP16-206ENST00000485067 PNPLA7Q6ZV29 1317 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 ECM29Q5VYK3 1845 aa10.48□□□□□ -0.73
USP16-206ENST00000485067 SPTLC2O15270 562 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 GTF2F1P35269 517 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP16-206ENST00000485067 MAP2K2P36507 400 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 KIF23Q02241 960 aaPredicted RBP10.47□□□□□ -0.73
USP16-206ENST00000485067 IQCB1Q15051 598 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 APOA5Q6Q788 366 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 CYB5R4Q7L1T6 521 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 IFNL3Q8IZI9 196 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 MAGEB6Q8N7X4 407 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 IGDCC4Q8TDY8 1250 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 CDC5LQ99459 802 aaKnown RBP10.47□□□□□ -0.73
USP16-206ENST00000485067 NAPBQ9H115 298 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 RABL2BQ9UNT1 228 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 NID2Q14112 1375 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 ZBTB43O43298 467 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 VDRP11473 427 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 CHRNDQ07001 517 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 PSMD2Q13200 908 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 C11orf96Q7Z7L8 435 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 ELOA2Q8IYF1 753 aaPredicted RBP10.47□□□□□ -0.73
USP16-206ENST00000485067 SPC24Q8NBT2 197 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 WASF1Q92558 559 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 RSPH9Q9H1X1 276 aaPredicted RBP10.47□□□□□ -0.73
USP16-206ENST00000485067 USP21Q9UK80 565 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 IVNS1ABPQ9Y6Y0 642 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 STK36Q9NRP7 1315 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 BTAF1O14981 1849 aa10.47□□□□□ -0.73
USP16-206ENST00000485067 B4E1Z4 1266 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 SMIM22K7EJ46 135 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 CCDC175P0C221 793 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 KCNA2P16389 499 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 TRIM29Q14134 588 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 ANO1Q5XXA6 986 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 DRC7Q8IY82 874 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 CEP57L1Q8IYX8 460 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 ANKRD20A12PQ8NF67 263 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 MRFAP1L1Q96HT8 127 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 ALG1Q9BT22 464 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 KCNF1Q9H3M0 494 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 LY9Q9HBG7 655 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 SENP2Q9HC62 589 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 CLIC4Q9Y696 253 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 A0A1B0GUL6 1792 aa10.46□□□□□ -0.73
USP16-206ENST00000485067 BECN2A8MW95 431 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 PRKAB2O43741 272 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 MBD4O95243 580 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 CMA1P23946 247 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 KLRK1P26718 216 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 RCAN1P53805 252 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 SART3Q15020 963 aaKnown RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 ZRSR1Q15695 479 aaKnown RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 ZNF394Q53GI3 561 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 TMEM67Q5HYA8 995 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 AKNAD1Q5T1N1 836 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 ANKRD13BQ86YJ7 626 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 C1orf131Q8NDD1 294 aaKnown RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 CELF1Q92879 486 aaKnown RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 SDF4Q9BRK5 362 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 SEZ6LQ9BYH1 1024 aa10.46□□□□□ -0.74
USP16-206ENST00000485067 RNF41Q9H4P4 317 aaPredicted RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 CPSF2Q9P2I0 782 aaKnown RBP10.46□□□□□ -0.74
USP16-206ENST00000485067 NEMFO60524 1076 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 PPP6R2O75170 966 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 MYBL2P10244 700 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 ALDH1B1P30837 517 aa10.45□□□□□ -0.74
USP16-206ENST00000485067 IARSP41252 1262 aaKnown RBP10.45□□□□□ -0.74
USP16-206ENST00000485067 GYG1P46976 350 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms