RNA–Protein interactions for RNA: ENST00000485036.5

TNFRSF25-215, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-215ENST00000485036 STAG2Q8N3U4 1231 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 TTLL1O95922 423 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 USP28Q96RU2 1077 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 CSRNP1Q96S65 589 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 LZTS2Q9BRK4 669 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 TRIM34Q9BYJ4 488 aa29.25■■■□□ 2.27
TNFRSF25-215ENST00000485036 FAM196BA6NMK8 535 aa29.24■■■□□ 2.27
TNFRSF25-215ENST00000485036 MYO1BO43795 1136 aa29.24■■■□□ 2.27
TNFRSF25-215ENST00000485036 CERKLQ49MI3 558 aaPredicted RBP29.24■■■□□ 2.27
TNFRSF25-215ENST00000485036 CAVIN1Q6NZI2 390 aaKnown RBP29.24■■■□□ 2.27
TNFRSF25-215ENST00000485036 SHISA4Q96DD7 197 aa29.24■■■□□ 2.27
TNFRSF25-215ENST00000485036 HERC5Q9UII4 1024 aaKnown RBP29.24■■■□□ 2.27
TNFRSF25-215ENST00000485036 XBP1P17861 261 aa29.23■■■□□ 2.27
TNFRSF25-215ENST00000485036 RCOR1Q9UKL0 485 aa29.23■■■□□ 2.27
TNFRSF25-215ENST00000485036 SHTN1A0MZ66 631 aa29.23■■■□□ 2.27
TNFRSF25-215ENST00000485036 SNHG28P0DPA3 235 aa29.23■■■□□ 2.27
TNFRSF25-215ENST00000485036 GMPSP49915 693 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 SAFBQ15424 915 aaKnown RBP eCLIP29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 PFKFB3Q16875 520 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 NBPF9Q3BBW0 867 aa29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 PHF20Q9BVI0 1012 aa29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 FOXP1Q9H334 677 aaPredicted RBP29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 RTEL1Q9NZ71 1219 aa29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 KCNJ14Q9UNX9 436 aa29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 BAZ2BQ9UIF8 2168 aaKnown RBP29.22■■■□□ 2.27
TNFRSF25-215ENST00000485036 ZNF541Q9H0D2 1346 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 MPHOSPH10O00566 681 aaKnown RBP29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 PARP1P09874 1014 aaKnown RBP29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 SCG2P13521 617 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 SMARCA1P28370 1054 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 SLC35G1Q2M3R5 365 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 CLEC10AQ8IUN9 316 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 DIS3L2Q8IYB7 885 aaKnown RBP29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 SPZ1Q9BXG8 430 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 FTOQ9C0B1 505 aaKnown RBP eCLIP29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 VEZTQ9HBM0 779 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 POLR3EQ9NVU0 708 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 TMEM63CQ9P1W3 806 aa29.21■■■□□ 2.27
TNFRSF25-215ENST00000485036 hCG_1642624A0A1W2PR95 340 aa29.2■■■□□ 2.27
TNFRSF25-215ENST00000485036 PDHBP11177 359 aa29.2■■■□□ 2.27
TNFRSF25-215ENST00000485036 TMEM179Q6ZVK1 233 aa29.2■■■□□ 2.27
TNFRSF25-215ENST00000485036 RASGRP2Q7LDG7 609 aa29.2■■■□□ 2.27
TNFRSF25-215ENST00000485036 CLIP2Q9UDT6 1046 aa29.2■■■□□ 2.27
TNFRSF25-215ENST00000485036 LMNB1P20700 586 aa29.2■■■□□ 2.26
TNFRSF25-215ENST00000485036 VPS54Q9P1Q0 977 aa29.2■■■□□ 2.26
TNFRSF25-215ENST00000485036 PGAP2Q9UHJ9 254 aa29.2■■■□□ 2.26
TNFRSF25-215ENST00000485036 CYTH3O43739 400 aa29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 NASPP49321 788 aaPredicted RBP29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 GNL2Q13823 731 aaKnown RBP29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 NOSTRINQ8IVI9 506 aa29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 MICALL2Q8IY33 904 aa29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 LRRC47Q8N1G4 583 aaKnown RBP29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 KANSL2Q9H9L4 492 aa29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 NYAP2Q9P242 653 aa29.19■■■□□ 2.26
TNFRSF25-215ENST00000485036 KLRF2D3W0D1 207 aa29.18■■■□□ 2.26
TNFRSF25-215ENST00000485036 ASPRV1Q53RT3 343 aa29.18■■■□□ 2.26
TNFRSF25-215ENST00000485036 MKL1Q969V6 931 aa29.18■■■□□ 2.26
TNFRSF25-215ENST00000485036 BTBD18B2RXH4 712 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 YEATS4O95619 227 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 USP17L2Q6R6M4 530 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 ARHGAP27Q6ZUM4 889 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 PGBD1Q96JS3 809 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 SYT17Q9BSW7 474 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 MTMR7Q9Y216 660 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 GJA3Q9Y6H8 435 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 USP17L5A8MUK1 530 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 TBC1D12O60347 775 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 EGFRP00533 1210 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 CEBPZQ03701 1054 aaKnown RBP29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 ABCB5Q2M3G0 1257 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 ZSCAN23Q3MJ62 389 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 TMEM39BQ9GZU3 492 aa29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.17■■■□□ 2.26
TNFRSF25-215ENST00000485036 GOLGA8HP0CJ92 632 aa29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 NPY5RQ15761 445 aa29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 SHROOM1Q2M3G4 852 aaPredicted RBP29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 LINC00301Q8NCQ3 95 aa29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 SYAP1Q96A49 352 aaPredicted RBP29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 SH3GLB2Q9NR46 395 aa29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 CNOT7Q9UIV1 285 aaKnown RBP29.16■■■□□ 2.26
TNFRSF25-215ENST00000485036 FAM177A1Q8N128 213 aaPredicted RBP29.15■■■□□ 2.26
TNFRSF25-215ENST00000485036 CLIC4Q9Y696 253 aa29.15■■■□□ 2.26
TNFRSF25-215ENST00000485036 GDF11O95390 407 aa29.14■■■□□ 2.26
TNFRSF25-215ENST00000485036 TNNI2P48788 182 aa29.14■■■□□ 2.26
TNFRSF25-215ENST00000485036 ZNF445P59923 1031 aa29.14■■■□□ 2.26
TNFRSF25-215ENST00000485036 MAP3K10Q02779 954 aa29.14■■■□□ 2.26
TNFRSF25-215ENST00000485036 RRP1BQ14684 758 aaKnown RBP29.14■■■□□ 2.26
TNFRSF25-215ENST00000485036 EEF2P13639 858 aaKnown RBP29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 VEGFAP15692 232 aaPredicted RBP29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 KRT2P35908 639 aa29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 ZNF543Q08ER8 600 aa29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 TNFAIP1Q13829 316 aa29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 SEPT2Q15019 361 aa29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 RBM26Q5T8P6 1007 aaKnown RBP29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 ANO1Q5XXA6 986 aa29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 OXER1Q8TDS5 423 aa29.14■■■□□ 2.25
TNFRSF25-215ENST00000485036 ICA1Q05084 483 aa29.13■■■□□ 2.25
TNFRSF25-215ENST00000485036 NR5A1Q13285 461 aa29.13■■■□□ 2.25
TNFRSF25-215ENST00000485036 SIAH1Q8IUQ4 282 aa29.13■■■□□ 2.25
TNFRSF25-215ENST00000485036 KCNG4Q8TDN1 519 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms