RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 ISY1Q9ULR0 285 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP2-217ENST00000484546 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
CDK5RAP2-217ENST00000484546 MGAMO43451 1857 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 SGSM2O43147 1006 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CDC45O75419 566 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CAPN15O75808 1086 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 ECM2O94769 699 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 TTLL1O95922 423 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 AKNAD1Q5T1N1 836 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 NEDD1Q8NHV4 660 aa13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 RPAP3Q9H6T3 665 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-217ENST00000484546 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 LAMA4Q16363 1823 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 ORC4O43929 436 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CTGFP29279 349 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 SIAH1Q8IUQ4 282 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 SPICE1Q8N0Z3 855 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 ANKRD13CQ8N6S4 541 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 STAG1Q8WVM7 1258 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 ESR2Q92731 530 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CEP95Q96GE4 821 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 VCPKMTQ9H867 229 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 NYAP2Q9P242 653 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CLIP2Q9UDT6 1046 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 STX8Q9UNK0 236 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDK5RAP2-217ENST00000484546 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 HOXD10P28358 340 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 PSMC4P43686 418 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 NT5C2P49902 561 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 FCGRTP55899 365 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 HERVK_113P62684 666 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 TRDNQ13061 729 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 FAM110CQ1W6H9 321 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 TBC1D10CQ8IV04 446 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 IL25Q9H293 177 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CNNM2Q9H8M5 875 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 MTMR4Q9NYA4 1195 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 PTPN22Q9Y2R2 807 aa13.85□□□□□ -0.19
CDK5RAP2-217ENST00000484546 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 IGKV6D-41A0A0C4DH26 115 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 FLOT1O75955 427 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 KIAA1755Q5JYT7 1200 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 IQCA1Q86XH1 822 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 KRT23Q9C075 422 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 HTTP42858 3142 aa13.84□□□□□ -0.19
CDK5RAP2-217ENST00000484546 PARP14Q460N5 1801 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 CCDC85CA6NKD9 419 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 GNRH1P01148 92 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 PTH1RQ03431 593 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 COG2Q14746 738 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 CCDC178Q5BJE1 867 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 RALYLQ86SE5 291 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 GPRC5AQ8NFJ5 357 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 HOXC10Q9NYD6 342 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 TACC3Q9Y6A5 838 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 PTCH2Q9Y6C5 1203 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 RLFQ13129 1914 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 MYH4Q9Y623 1939 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 NEDD4P46934 1319 aa13.83□□□□□ -0.2
CDK5RAP2-217ENST00000484546 F5H6K3 240 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 PEX10O60683 326 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 KDM4AO75164 1064 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 FGRP09769 529 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 CCNA1P78396 465 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 KLRC3Q07444 240 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 IKQ13123 557 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 FAM83BQ5T0W9 1011 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 COA7Q96BR5 231 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 UBAC1Q9BSL1 405 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 TXNRD2Q9NNW7 524 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 SRRDQ9UH36 339 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 MYPNQ86TC9 1320 aa13.82□□□□□ -0.2
CDK5RAP2-217ENST00000484546 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP2-217ENST00000484546 B4E1Z4 1266 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms