RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 SPICE1Q8N0Z3 855 aa28.07■■■□□ 2.08
RHBDF1-208ENST00000482904 SOCS4Q8WXH5 440 aa28.07■■■□□ 2.08
RHBDF1-208ENST00000482904 RNF208Q9H0X6 261 aa28.07■■■□□ 2.08
RHBDF1-208ENST00000482904 VCPKMTQ9H867 229 aa28.07■■■□□ 2.08
RHBDF1-208ENST00000482904 SPDYE16A6NNV3 312 aaPredicted RBP28.06■■■□□ 2.08
RHBDF1-208ENST00000482904 RAD21O60216 631 aa28.06■■■□□ 2.08
RHBDF1-208ENST00000482904 EEF2P13639 858 aaKnown RBP28.06■■■□□ 2.08
RHBDF1-208ENST00000482904 RASA1P20936 1047 aa28.06■■■□□ 2.08
RHBDF1-208ENST00000482904 CCDC129Q6ZRS4 1044 aa28.06■■■□□ 2.08
RHBDF1-208ENST00000482904 PORCNQ9H237 461 aa28.06■■■□□ 2.08
RHBDF1-208ENST00000482904 SLC3A2P08195 630 aaKnown RBP28.05■■■□□ 2.08
RHBDF1-208ENST00000482904 Q3C1V9 767 aa28.05■■■□□ 2.08
RHBDF1-208ENST00000482904 WDR78Q5VTH9 848 aa28.05■■■□□ 2.08
RHBDF1-208ENST00000482904 NUDT12Q9BQG2 462 aa28.05■■■□□ 2.08
RHBDF1-208ENST00000482904 GOPCQ9HD26 462 aa28.05■■■□□ 2.08
RHBDF1-208ENST00000482904 CENPFP49454 3210 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 PRDM1O75626 825 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 CNMDO75829 334 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 LBX2Q6XYB7 198 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 GPR142Q7Z601 462 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 SIAH1Q8IUQ4 282 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 NKX2-3Q8TAU0 364 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 RILPL2Q969X0 211 aa28.04■■■□□ 2.08
RHBDF1-208ENST00000482904 WDR46O15213 610 aaKnown RBP28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 FLOT1O75955 427 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 COG2Q14746 738 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 KIAA1755Q5JYT7 1200 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 POTEEQ6S8J3 1075 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 SAMD1Q6SPF0 538 aaPredicted RBP28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 PLEKHH3Q7Z736 793 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 ZNF444Q8N0Y2 327 aaPredicted RBP28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 UNC93B1Q9H1C4 597 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 GJD2Q9UKL4 321 aa28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 KIAA0100Q14667 2235 aaKnown RBP28.03■■■□□ 2.08
RHBDF1-208ENST00000482904 HMGCRP04035 888 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 CYP2B6P20813 491 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 PDE4BQ07343 736 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 PPARAQ07869 468 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 HELLSQ9NRZ9 838 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 HOXC10Q9NYD6 342 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 BTBD7Q9P203 1132 aa28.02■■■□□ 2.08
RHBDF1-208ENST00000482904 GJB1P08034 283 aa28.01■■■□□ 2.07
RHBDF1-208ENST00000482904 PLEKHM2Q8IWE5 1019 aa28.01■■■□□ 2.07
RHBDF1-208ENST00000482904 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.01■■■□□ 2.07
RHBDF1-208ENST00000482904 A0A0D9SFI3 127 aa28■■■□□ 2.07
RHBDF1-208ENST00000482904 FAM227BQ96M60 508 aa28■■■□□ 2.07
RHBDF1-208ENST00000482904 IVNS1ABPQ9Y6Y0 642 aa28■■■□□ 2.07
RHBDF1-208ENST00000482904 RGS2P41220 211 aa27.99■■■□□ 2.07
RHBDF1-208ENST00000482904 TICAM2Q86XR7 235 aa27.99■■■□□ 2.07
RHBDF1-208ENST00000482904 TSPY3P0CV98 308 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 TSPY8P0CW00 308 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 ZKSCAN1P17029 563 aaPredicted RBP27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 GJA8P48165 433 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 NMIQ13287 307 aaPredicted RBP27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 MCMDC2Q4G0Z9 681 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 VPS53Q5VIR6 699 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 MB21D1Q8N884 522 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 U2AF1L4Q8WU68 220 aaKnown RBP27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 SHISA4Q96DD7 197 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 APBA2Q99767 749 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 OSBPL3Q9H4L5 887 aa27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 GREB1LQ9C091 1923 aaPredicted RBP27.98■■■□□ 2.07
RHBDF1-208ENST00000482904 DSG3P32926 999 aa27.97■■■□□ 2.07
RHBDF1-208ENST00000482904 PLS1Q14651 629 aa27.97■■■□□ 2.07
RHBDF1-208ENST00000482904 TRIB2Q92519 343 aa27.97■■■□□ 2.07
RHBDF1-208ENST00000482904 ATG4CQ96DT6 458 aa27.97■■■□□ 2.07
RHBDF1-208ENST00000482904 NYAP2Q9P242 653 aa27.97■■■□□ 2.07
RHBDF1-208ENST00000482904 A0A0G2JMZ2 1700 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 FOXP2O15409 715 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 XRCC5P13010 732 aaKnown RBP27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 MORN1Q5T089 497 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 FAM83BQ5T0W9 1011 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 TRMT44Q8IYL2 757 aaKnown RBP27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 SPATC1LQ9H0A9 340 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 CLIP2Q9UDT6 1046 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 PLIN4Q96Q06 1357 aa27.96■■■□□ 2.07
RHBDF1-208ENST00000482904 CTDSPL2Q05D32 466 aa27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 PRPF38BQ5VTL8 546 aaKnown RBP27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 CEP95Q96GE4 821 aa27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 DEFB118Q96PH6 123 aa27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 BRCA2P51587 3418 aa27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 PLXNB2O15031 1838 aa27.95■■■□□ 2.06
RHBDF1-208ENST00000482904 IGKV6D-41A0A0C4DH26 115 aa27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 TRIM32Q13049 653 aa27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 MAP2K5Q13163 448 aa27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 FAM47AQ5JRC9 791 aa27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 MOV10L1Q9BXT6 1211 aaKnown RBP27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 DIAPH3Q9NSV4 1193 aa27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 TNRC18O15417 2968 aaPredicted RBP27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 DOCK3Q8IZD9 2030 aa27.94■■■□□ 2.06
RHBDF1-208ENST00000482904 CCDC171Q6TFL3 1326 aa27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 SLC15A5A6NIM6 579 aa27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 TTLL1O95922 423 aa27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 MFAP1P55081 439 aaKnown RBP27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 TFAP4Q01664 338 aa27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 ZNF589Q86UQ0 364 aaPredicted RBP27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 USP6NLQ92738 828 aa27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 NUP88Q99567 741 aaPredicted RBP27.93■■■□□ 2.06
RHBDF1-208ENST00000482904 HMX1Q9NP08 348 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms