RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
CCNC-204ENST00000482541 SWAP70Q9UH65 585 aa9.34□□□□□ -0.91
CCNC-204ENST00000482541 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.92
CCNC-204ENST00000482541 GJA8P48165 433 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 HERVK_113P62684 666 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 RAB3GAP1Q15042 981 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 LHX8Q68G74 356 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 GPRC5AQ8NFJ5 357 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 FEZ1Q99689 392 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 RNF208Q9H0X6 261 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 ARMT1Q9H993 441 aa9.34□□□□□ -0.92
CCNC-204ENST00000482541 KIAA0100Q14667 2235 aaKnown RBP9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 MBD4O95243 580 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 CCL5P13501 91 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 GUCY1A2P33402 732 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 AMOTL1Q8IY63 956 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 CCDC17Q96LX7 622 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 RBPJLQ9UBG7 517 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 GJD2Q9UKL4 321 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 PCDHB15Q9Y5E8 787 aa9.33□□□□□ -0.92
CCNC-204ENST00000482541 DOCK3Q8IZD9 2030 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 PRKAB2O43741 272 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 C12orf60Q5U649 245 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 TMEM179Q6ZVK1 233 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 KBTBD3Q8NAB2 608 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 PUS7LQ9H0K6 701 aaKnown RBP9.32□□□□□ -0.92
CCNC-204ENST00000482541 RABGAP1Q9Y3P9 1069 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 DDX60LQ5H9U9 1706 aaKnown RBP9.32□□□□□ -0.92
CCNC-204ENST00000482541 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 MYH7P12883 1935 aa9.32□□□□□ -0.92
CCNC-204ENST00000482541 NAV1Q8NEY1 1877 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 USP17L12C9JPN9 530 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 USP17L21D6R901 530 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 GPR37O15354 613 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 SGPL1O95470 568 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 ZFYP08048 801 aaPredicted RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 XRCC5P13010 732 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 ELNP15502 786 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 MAPK4P31152 587 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 SEPT2Q15019 361 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 Q3C1V9 767 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 LBX2Q6XYB7 198 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 ACER1Q8TDN7 264 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 GCC1Q96CN9 775 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 NUDT12Q9BQG2 462 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 TXNRD2Q9NNW7 524 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 SLC4A4Q9Y6R1 1079 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 PDE4DIPQ5VU43 2346 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 CENPFP49454 3210 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 MPHOSPH10O00566 681 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 ERC2O15083 957 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 INHAP05111 366 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 VCAM1P19320 739 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 ERVK-9P63128 1117 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 ERVK-24P63145 666 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 CCNA1P78396 465 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 AAMPQ13685 434 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 ZYXQ15942 572 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 CTR9Q6PD62 1173 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 CCAR1Q8IX12 1150 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 U2AF1L4Q8WU68 220 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 PTCD2Q8WV60 388 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 SOCS4Q8WXH5 440 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 APPBP2Q92624 585 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 STRBPQ96SI9 672 aaKnown RBP9.31□□□□□ -0.92
CCNC-204ENST00000482541 UNC93B1Q9H1C4 597 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 HOXC10Q9NYD6 342 aa9.31□□□□□ -0.92
CCNC-204ENST00000482541 A0A1W2PRG0 241 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 RNF113AO15541 343 aaKnown RBP9.3□□□□□ -0.92
CCNC-204ENST00000482541 EVI5O60447 810 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 HMGCRP04035 888 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 CHGBP05060 677 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 CYP2D6P10635 497 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 CDK8P49336 464 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 COG2Q14746 738 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 SBK1Q52WX2 424 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 POTEEQ6S8J3 1075 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 C16orf86Q6ZW13 317 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
CCNC-204ENST00000482541 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
CCNC-204ENST00000482541 LPAR1Q92633 364 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 DDX12PQ92771 950 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
CCNC-204ENST00000482541 ARHGEF10LQ9HCE6 1279 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms