RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 NKX2-3Q8TAU0 364 aa18.73■□□□□ 0.59
COL16A1-212ENST00000482478 NUDT12Q9BQG2 462 aa18.73■□□□□ 0.59
COL16A1-212ENST00000482478 PORCNQ9H237 461 aa18.73■□□□□ 0.59
COL16A1-212ENST00000482478 ZNF287Q9HBT7 754 aa18.73■□□□□ 0.59
COL16A1-212ENST00000482478 RBPJLQ9UBG7 517 aa18.73■□□□□ 0.59
COL16A1-212ENST00000482478 RABGAP1Q9Y3P9 1069 aa18.73■□□□□ 0.59
COL16A1-212ENST00000482478 SUPT16HQ9Y5B9 1047 aaKnown RBP18.73■□□□□ 0.59
COL16A1-212ENST00000482478 GREB1LQ9C091 1923 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-212ENST00000482478 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 FLOT1O75955 427 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 CYP2B6P20813 491 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
COL16A1-212ENST00000482478 GPR142Q7Z601 462 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 SHISA4Q96DD7 197 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 VCPKMTQ9H867 229 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 KANSL2Q9H9L4 492 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
COL16A1-212ENST00000482478 WDR46O15213 610 aaKnown RBP18.71■□□□□ 0.59
COL16A1-212ENST00000482478 PRDM1O75626 825 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 CNMDO75829 334 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
COL16A1-212ENST00000482478 EEF2P13639 858 aaKnown RBP18.71■□□□□ 0.59
COL16A1-212ENST00000482478 ZKSCAN1P17029 563 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-212ENST00000482478 RASA1P20936 1047 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 PLEKHH3Q7Z736 793 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 IFNL3Q8IZI9 196 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 APBA2Q99767 749 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 STAP2Q9UGK3 403 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
COL16A1-212ENST00000482478 TNRC18O15417 2968 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-212ENST00000482478 PLXNB2O15031 1838 aa18.7■□□□□ 0.58
COL16A1-212ENST00000482478 PATL2C9JE40 543 aaKnown RBP18.7■□□□□ 0.58
COL16A1-212ENST00000482478 GJB1P08034 283 aa18.7■□□□□ 0.58
COL16A1-212ENST00000482478 RGS2P41220 211 aa18.7■□□□□ 0.58
COL16A1-212ENST00000482478 IRX6P78412 446 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-212ENST00000482478 LBX2Q6XYB7 198 aa18.7■□□□□ 0.58
COL16A1-212ENST00000482478 CHD1LQ86WJ1 897 aa18.7■□□□□ 0.58
COL16A1-212ENST00000482478 U2AF1L4Q8WU68 220 aaKnown RBP18.7■□□□□ 0.58
COL16A1-212ENST00000482478 IVNS1ABPQ9Y6Y0 642 aa18.7■□□□□ 0.58
COL16A1-212ENST00000482478 MKI67P46013 3256 aaKnown RBP18.7■□□□□ 0.58
COL16A1-212ENST00000482478 GJA8P48165 433 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 PDE4BQ07343 736 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 PPARAQ07869 468 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 PLS1Q14651 629 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 Q3C1V9 767 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 KIAA1755Q5JYT7 1200 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 TRIB2Q92519 343 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
COL16A1-212ENST00000482478 IGHDP01880 384 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 COG2Q14746 738 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 POTEEQ6S8J3 1075 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
COL16A1-212ENST00000482478 ATG4CQ96DT6 458 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 DEFB118Q96PH6 123 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.58
COL16A1-212ENST00000482478 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 ISY1Q9ULR0 285 aaKnown RBP18.68■□□□□ 0.58
COL16A1-212ENST00000482478 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
COL16A1-212ENST00000482478 DOCK3Q8IZD9 2030 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 A0A0D9SFI3 127 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 FARP2O94887 1054 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-212ENST00000482478 TSPY3P0CV98 308 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 TSPY8P0CW00 308 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 PRKAR2AP13861 404 aaKnown RBP18.67■□□□□ 0.58
COL16A1-212ENST00000482478 NUCB1Q02818 461 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 MB21D1Q8N884 522 aa18.67■□□□□ 0.58
COL16A1-212ENST00000482478 PARP14Q460N5 1801 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 ZNF236Q9UL36 1845 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 TRIM32Q13049 653 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 SIAH1Q8IUQ4 282 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 LRRC47Q8N1G4 583 aaKnown RBP18.66■□□□□ 0.58
COL16A1-212ENST00000482478 FAM227BQ96M60 508 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL16A1-212ENST00000482478 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 PAK6Q9NQU5 681 aaPredicted RBP18.66■□□□□ 0.58
COL16A1-212ENST00000482478 HELLSQ9NRZ9 838 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 HOXC10Q9NYD6 342 aa18.66■□□□□ 0.58
COL16A1-212ENST00000482478 DSG3P32926 999 aa18.65■□□□□ 0.58
COL16A1-212ENST00000482478 MAP2K5Q13163 448 aa18.65■□□□□ 0.58
COL16A1-212ENST00000482478 NMIQ13287 307 aaPredicted RBP18.65■□□□□ 0.58
COL16A1-212ENST00000482478 MORN1Q5T089 497 aa18.65■□□□□ 0.58
COL16A1-212ENST00000482478 VPS53Q5VIR6 699 aa18.65■□□□□ 0.58
COL16A1-212ENST00000482478 TRMT44Q8IYL2 757 aaKnown RBP18.65■□□□□ 0.58
COL16A1-212ENST00000482478 CEP95Q96GE4 821 aa18.65■□□□□ 0.58
COL16A1-212ENST00000482478 MOV10L1Q9BXT6 1211 aaKnown RBP18.65■□□□□ 0.58
COL16A1-212ENST00000482478 HMX1Q9NP08 348 aaPredicted RBP18.65■□□□□ 0.58
COL16A1-212ENST00000482478 MYH4Q9Y623 1939 aa18.64■□□□□ 0.58
COL16A1-212ENST00000482478 TFRCP02786 760 aaKnown RBP18.64■□□□□ 0.57
COL16A1-212ENST00000482478 XRCC5P13010 732 aaKnown RBP18.64■□□□□ 0.57
COL16A1-212ENST00000482478 GRB14Q14449 540 aa18.64■□□□□ 0.57
COL16A1-212ENST00000482478 FAM47AQ5JRC9 791 aa18.64■□□□□ 0.57
COL16A1-212ENST00000482478 NCAPG2Q86XI2 1143 aa18.64■□□□□ 0.57
COL16A1-212ENST00000482478 NUP88Q99567 741 aaPredicted RBP18.64■□□□□ 0.57
COL16A1-212ENST00000482478 TOMM22Q9NS69 142 aa18.64■□□□□ 0.57
COL16A1-212ENST00000482478 FBXO28Q9NVF7 368 aa18.64■□□□□ 0.57
COL16A1-212ENST00000482478 CCDC171Q6TFL3 1326 aa18.64■□□□□ 0.57
COL16A1-212ENST00000482478 RLFQ13129 1914 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms