RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RABGAP1Q9Y3P9 1069 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 PEX10O60683 326 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 MYCP01106 439 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-213ENST00000482192 UBXN2AP68543 259 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 CCNA1P78396 465 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 ATP2B2Q01814 1243 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 PDE4BQ07343 736 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 PPARAQ07869 468 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 COG2Q14746 738 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 ZNF444Q8N0Y2 327 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-213ENST00000482192 SPICE1Q8N0Z3 855 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 FAM227BQ96M60 508 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
HMGN1-213ENST00000482192 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 HOXC10Q9NYD6 342 aa14.16□□□□□ -0.14
HMGN1-213ENST00000482192 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-213ENST00000482192 A0A0D9SFI3 127 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-213ENST00000482192 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
HMGN1-213ENST00000482192 FOXP2O15409 715 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 PRDM1O75626 825 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 ELNP15502 786 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 NMIQ13287 307 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-213ENST00000482192 KIAA1755Q5JYT7 1200 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 SOCS4Q8WXH5 440 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 GJD2Q9UKL4 321 aa14.15□□□□□ -0.14
HMGN1-213ENST00000482192 GREB1LQ9C091 1923 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-213ENST00000482192 CNMDO75829 334 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 FLOT1O75955 427 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 SDSP20132 328 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 Q3C1V9 767 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 VPS53Q5VIR6 699 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 NUDT12Q9BQG2 462 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 PORCNQ9H237 461 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 CWC22Q9HCG8 908 aaKnown RBP14.14□□□□□ -0.15
HMGN1-213ENST00000482192 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
HMGN1-213ENST00000482192 PLIN4Q96Q06 1357 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 IGKV6D-41A0A0C4DH26 115 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 RAD21O60216 631 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 INHAP05111 366 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 TSPY3P0CV98 308 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 TSPY8P0CW00 308 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 CCL5P13501 91 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 EN2P19622 333 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-213ENST00000482192 MFAP1P55081 439 aaKnown RBP14.13□□□□□ -0.15
HMGN1-213ENST00000482192 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-213ENST00000482192 MTFR1Q15390 333 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 ALX1Q15699 326 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 GPR142Q7Z601 462 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 PLEKHH3Q7Z736 793 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 MB21D1Q8N884 522 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 NKX2-3Q8TAU0 364 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 BTBD7Q9P203 1132 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 ANAPC4Q9UJX5 808 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 HTTP42858 3142 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 CCDC171Q6TFL3 1326 aa14.13□□□□□ -0.15
HMGN1-213ENST00000482192 HIP1O00291 1037 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 HMGCRP04035 888 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 XRCC5P13010 732 aaKnown RBP14.12□□□□□ -0.15
HMGN1-213ENST00000482192 DSG3P32926 999 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 ZNF589Q86UQ0 364 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-213ENST00000482192 NEDD1Q8NHV4 660 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 RNF208Q9H0X6 261 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 DIAPH3Q9NSV4 1193 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 MTMR4Q9NYA4 1195 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 A0A0G2JMZ2 1700 aa14.12□□□□□ -0.15
HMGN1-213ENST00000482192 TTLL1O95922 423 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 GJB1P08034 283 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 HSPD1P10809 573 aaKnown RBP14.11□□□□□ -0.15
HMGN1-213ENST00000482192 CYP2B6P20813 491 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 PDE4AP27815 886 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 RGS2P41220 211 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 TFAP4Q01664 338 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 FAM47AQ5JRC9 791 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 MORN1Q5T089 497 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 TRMT44Q8IYL2 757 aaKnown RBP14.11□□□□□ -0.15
HMGN1-213ENST00000482192 MKL1Q969V6 931 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 UNC93B1Q9H1C4 597 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 CLIP2Q9UDT6 1046 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.11□□□□□ -0.15
HMGN1-213ENST00000482192 IVNS1ABPQ9Y6Y0 642 aa14.11□□□□□ -0.15
HMGN1-213ENST00000482192 F5H6K3 240 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 NDUFB10O96000 172 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 FGAP02671 866 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 GJA8P48165 433 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 KLRC3Q07444 240 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 FAM83BQ5T0W9 1011 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 CWC27Q6UX04 472 aaKnown RBP14.1□□□□□ -0.15
HMGN1-213ENST00000482192 SHCBP1Q8NEM2 672 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 TRIB2Q92519 343 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 USP6NLQ92738 828 aa14.1□□□□□ -0.15
HMGN1-213ENST00000482192 ATG4CQ96DT6 458 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms