RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 PPP6R2O75170 966 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 RAD17O75943 681 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 TTLL1O95922 423 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
GGPS1-205ENST00000482013 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
GGPS1-205ENST00000482013 CALML3P27482 149 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 PTGER2P43116 358 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 STK38Q15208 465 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 CIAPIN1Q6FI81 312 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 GALNT17Q6IS24 598 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 GAS2L3Q86XJ1 694 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
GGPS1-205ENST00000482013 CEP95Q96GE4 821 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 PRMT6Q96LA8 375 aaPredicted RBP13.49□□□□□ -0.25
GGPS1-205ENST00000482013 TDRD3Q9H7E2 651 aaKnown RBP13.49□□□□□ -0.25
GGPS1-205ENST00000482013 GRPEL1Q9HAV7 217 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
GGPS1-205ENST00000482013 COL4A5P29400 1685 aa13.49□□□□□ -0.25
GGPS1-205ENST00000482013 BTBD18B2RXH4 712 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 AKR1B1P15121 316 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 KRT2P35908 639 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 CXCL9Q07325 125 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
GGPS1-205ENST00000482013 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
GGPS1-205ENST00000482013 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 FAM151AQ8WW52 585 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 MKL1Q969V6 931 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 TRIM34Q9BYJ4 488 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 NYAP2Q9P242 653 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
GGPS1-205ENST00000482013 HERC5Q9UII4 1024 aaKnown RBP13.48□□□□□ -0.25
GGPS1-205ENST00000482013 CEP131Q9UPN4 1083 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 MYH4Q9Y623 1939 aa13.48□□□□□ -0.25
GGPS1-205ENST00000482013 SYCE3A1L190 88 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 DDTLA6NHG4 134 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-205ENST00000482013 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 hCG_1984214I3L0E3 225 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 CTAGE5O15320 804 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 BMP15O95972 392 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 SNHG28P0DPA3 235 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 ME1P48163 572 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 CEBPZQ03701 1054 aaKnown RBP13.47□□□□□ -0.25
GGPS1-205ENST00000482013 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-205ENST00000482013 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 SH3BP5LQ7L8J4 393 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 FAM83AQ86UY5 434 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 ZSCAN29Q8IWY8 852 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-205ENST00000482013 ZFPM1Q8IX07 1006 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 STAG2Q8N3U4 1231 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-205ENST00000482013 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
GGPS1-205ENST00000482013 NUP62CLQ9H1M0 184 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 KANSL2Q9H9L4 492 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 PCDHAC2Q9Y5I4 1007 aa13.47□□□□□ -0.25
GGPS1-205ENST00000482013 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 NFKBIEO00221 500 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 MYO1BO43795 1136 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 LIG1P18858 919 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 CMA1P23946 247 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 TCP10Q12799 353 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 PTPAQ15257 358 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 RBM43Q6ZSC3 357 aaKnown RBP13.46□□□□□ -0.25
GGPS1-205ENST00000482013 TMEM179Q6ZVK1 233 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 CCAR1Q8IX12 1150 aaKnown RBP13.46□□□□□ -0.25
GGPS1-205ENST00000482013 CCDC148Q8NFR7 591 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
GGPS1-205ENST00000482013 CLSTN2Q9H4D0 955 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 RIOX1Q9H6W3 641 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 VPS54Q9P1Q0 977 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 CLIP2Q9UDT6 1046 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
GGPS1-205ENST00000482013 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
GGPS1-205ENST00000482013 TBC1D12O60347 775 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 CUTAO60888 179 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 PDHBP11177 359 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
GGPS1-205ENST00000482013 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 NLRP5P59047 1200 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 ZNF280AP59817 542 aaPredicted RBP13.45□□□□□ -0.26
GGPS1-205ENST00000482013 FAM160A1Q05DH4 1040 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 GPATCH4Q5T3I0 446 aaKnown RBP13.45□□□□□ -0.26
GGPS1-205ENST00000482013 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 MRPS27Q92552 414 aaKnown RBP13.45□□□□□ -0.26
GGPS1-205ENST00000482013 DPF2Q92785 391 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 RRP36Q96EU6 259 aaKnown RBP13.45□□□□□ -0.26
GGPS1-205ENST00000482013 FTOQ9C0B1 505 aaKnown RBP eCLIP13.45□□□□□ -0.26
GGPS1-205ENST00000482013 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
GGPS1-205ENST00000482013 FZD9O00144 591 aa13.44□□□□□ -0.26
GGPS1-205ENST00000482013 CACNB3P54284 484 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms