RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 RABGAP1Q9Y3P9 1069 aa20.91■□□□□ 0.94
ECHDC1-216ENST00000479525 RAD21O60216 631 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 ZKSCAN1P17029 563 aaPredicted RBP20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 CACNB2Q08289 660 aaPredicted RBP20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 C16orf86Q6ZW13 317 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 KBTBD3Q8NAB2 608 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 USP6NLQ92738 828 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 STRBPQ96SI9 672 aaKnown RBP20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 HMX1Q9NP08 348 aaPredicted RBP20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 FLRT1Q9NZU1 646 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 SWAP70Q9UH65 585 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 RPTORQ8N122 1335 aa20.9■□□□□ 0.94
ECHDC1-216ENST00000479525 MINDY4BA8MYZ0 360 aa20.89■□□□□ 0.93
ECHDC1-216ENST00000479525 ZSCAN25Q6NSZ9 544 aa20.89■□□□□ 0.93
ECHDC1-216ENST00000479525 SOCS4Q8WXH5 440 aa20.89■□□□□ 0.93
ECHDC1-216ENST00000479525 GCC1Q96CN9 775 aa20.89■□□□□ 0.93
ECHDC1-216ENST00000479525 CRISPLD2Q9H0B8 497 aa20.89■□□□□ 0.93
ECHDC1-216ENST00000479525 RGS2P41220 211 aa20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 NPLOC4Q8TAT6 608 aa20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 GTF3C2Q8WUA4 911 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 ATG4CQ96DT6 458 aa20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 GPATCH3Q96I76 525 aa20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 HTATIP2Q9BUP3 242 aa20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 EPB41L4AQ9HCS5 686 aaPredicted RBP20.88■□□□□ 0.93
ECHDC1-216ENST00000479525 GSG1L2A8MUP6 293 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 PLS1Q14651 629 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 AMOTL1Q8IY63 956 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 DDRGK1Q96HY6 314 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 APBA2Q99767 749 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 ARHGEF10LQ9HCE6 1279 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 FBXO28Q9NVF7 368 aa20.87■□□□□ 0.93
ECHDC1-216ENST00000479525 PLXNA1Q9UIW2 1896 aa20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 GPAA1O43292 621 aa20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 FLOT1O75955 427 aa20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 MAP2K5Q13163 448 aa20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 PI4K2BQ8TCG2 481 aa20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 APPBP2Q92624 585 aa20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 MOV10L1Q9BXT6 1211 aaKnown RBP20.86■□□□□ 0.93
ECHDC1-216ENST00000479525 PRDM1O75626 825 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 PTPREP23469 700 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 MNX1P50219 401 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 CCNA1P78396 465 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 COG2Q14746 738 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 MAP3K21Q5TCX8 1036 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 NUP88Q99567 741 aaPredicted RBP20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 VCPKMTQ9H867 229 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 TRIOBPQ9H2D6 2365 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 APPP05067 770 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 CCDC129Q6ZRS4 1044 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 RBM27Q9P2N5 1060 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
ECHDC1-216ENST00000479525 EVI5O60447 810 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 XRCC5P13010 732 aaKnown RBP20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 RASA1P20936 1047 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 CYP2C19P33261 490 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 FXR1P51114 621 aaKnown RBP eCLIP20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 C7orf61Q8IZ16 206 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 SPATC1LQ9H0A9 340 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 ARPP21Q9UBL0 812 aaPredicted RBP20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 ZMYND8Q9ULU4 1186 aaPredicted RBP20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 IVNS1ABPQ9Y6Y0 642 aa20.84■□□□□ 0.93
ECHDC1-216ENST00000479525 ZNF236Q9UL36 1845 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 SLC15A5A6NIM6 579 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 ERCC3P19447 782 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 DSG3P32926 999 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 TDO2P48775 406 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 FAM83BQ5T0W9 1011 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 ANKRD45Q5TZF3 282 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 ANO1Q5XXA6 986 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 NECAB2Q7Z6G3 386 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 NCAPG2Q86XI2 1143 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 CCDC17Q96LX7 622 aa20.83■□□□□ 0.92
ECHDC1-216ENST00000479525 CNGA1P29973 690 aa20.82■□□□□ 0.92
ECHDC1-216ENST00000479525 GRB14Q14449 540 aa20.82■□□□□ 0.92
ECHDC1-216ENST00000479525 MKNK2Q9HBH9 465 aa20.82■□□□□ 0.92
ECHDC1-216ENST00000479525 DNAH12Q6ZR08 3092 aa20.82■□□□□ 0.92
ECHDC1-216ENST00000479525 RANBP2P49792 3224 aaKnown RBP20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 SZT2Q5T011 3432 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 PFASO15067 1338 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 SYN1P17600 705 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 MX1P20591 662 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 ADORA2AP29274 412 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 TMEM132BQ14DG7 1078 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 TTC41PQ6P2S7 1318 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 TRPV1Q8NER1 839 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 HOXC10Q9NYD6 342 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 OGDHLQ9ULD0 1010 aa20.81■□□□□ 0.92
ECHDC1-216ENST00000479525 SMCHD1A6NHR9 2005 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 COBLO75128 1261 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 SBK1Q52WX2 424 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 LHX8Q68G74 356 aa20.8■□□□□ 0.92
ECHDC1-216ENST00000479525 DPP9Q86TI2 863 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms