RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CHGBP05060 677 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 HOXC6P09630 235 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 ATP5JP18859 108 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 BMP8BP34820 402 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 ADD2P35612 726 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 DYNLL2Q96FJ2 89 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 BOLA2Q9H3K6 86 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 A0A0C4DFX4 3053 aa20.21■□□□□ 0.83
TRIM13-208ENST00000478111 ZNFX1Q9P2E3 1918 aaKnown RBP20.2■□□□□ 0.82
TRIM13-208ENST00000478111 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
TRIM13-208ENST00000478111 GLRX3O76003 335 aaKnown RBP20.2■□□□□ 0.82
TRIM13-208ENST00000478111 GRB14Q14449 540 aa20.2■□□□□ 0.82
TRIM13-208ENST00000478111 NPLOC4Q8TAT6 608 aa20.2■□□□□ 0.82
TRIM13-208ENST00000478111 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
TRIM13-208ENST00000478111 ZNF236Q9UL36 1845 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 MBD4O95243 580 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 COG2Q14746 738 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 WDR78Q5VTH9 848 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 HAUS7Q99871 368 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
TRIM13-208ENST00000478111 ATP8A2Q9NTI2 1148 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 SWAP70Q9UH65 585 aa20.19■□□□□ 0.82
TRIM13-208ENST00000478111 AKR1B1P15121 316 aa20.18■□□□□ 0.82
TRIM13-208ENST00000478111 SYN1P17600 705 aa20.18■□□□□ 0.82
TRIM13-208ENST00000478111 TMEM179Q6ZVK1 233 aa20.18■□□□□ 0.82
TRIM13-208ENST00000478111 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
TRIM13-208ENST00000478111 LRCH3Q96II8 777 aa20.18■□□□□ 0.82
TRIM13-208ENST00000478111 MOV10L1Q9BXT6 1211 aaKnown RBP20.18■□□□□ 0.82
TRIM13-208ENST00000478111 HOXC10Q9NYD6 342 aa20.18■□□□□ 0.82
TRIM13-208ENST00000478111 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
TRIM13-208ENST00000478111 CYP2D7A0A087X1C5 515 aa20.17■□□□□ 0.82
TRIM13-208ENST00000478111 C12orf60Q5U649 245 aa20.17■□□□□ 0.82
TRIM13-208ENST00000478111 MFSD14CQ5VZR4 134 aa20.17■□□□□ 0.82
TRIM13-208ENST00000478111 IVNS1ABPQ9Y6Y0 642 aa20.17■□□□□ 0.82
TRIM13-208ENST00000478111 MAGEA10P43363 369 aaPredicted RBP20.16■□□□□ 0.82
TRIM13-208ENST00000478111 UBE3CQ15386 1083 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 LRRC26Q2I0M4 334 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 TRPV1Q8NER1 839 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 SPATC1LQ9H0A9 340 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 TMX2Q9Y320 296 aa20.16■□□□□ 0.82
TRIM13-208ENST00000478111 USP17L12C9JPN9 530 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 USP17L21D6R901 530 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 DSG3P32926 999 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 CYP2C19P33261 490 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 CDK8P49336 464 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 ATP2B2Q01814 1243 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 TANGO6Q9C0B7 1094 aa20.15■□□□□ 0.82
TRIM13-208ENST00000478111 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIM13-208ENST00000478111 SMCHD1A6NHR9 2005 aa20.14■□□□□ 0.81
TRIM13-208ENST00000478111 STRNO43815 780 aa20.14■□□□□ 0.81
TRIM13-208ENST00000478111 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
TRIM13-208ENST00000478111 SHCBP1Q8NEM2 672 aa20.14■□□□□ 0.81
TRIM13-208ENST00000478111 LPAR1Q92633 364 aa20.14■□□□□ 0.81
TRIM13-208ENST00000478111 PUS7LQ9H0K6 701 aaKnown RBP20.14■□□□□ 0.81
TRIM13-208ENST00000478111 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.81
TRIM13-208ENST00000478111 VCPKMTQ9H867 229 aa20.14■□□□□ 0.81
TRIM13-208ENST00000478111 DDX20Q9UHI6 824 aaKnown RBP20.14■□□□□ 0.81
TRIM13-208ENST00000478111 GREB1LQ9C091 1923 aaPredicted RBP20.14■□□□□ 0.81
TRIM13-208ENST00000478111 COBLO75128 1261 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 CYBAP13498 195 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 ERCC3P19447 782 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 ADORA2AP29274 412 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 ICA1Q05084 483 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 C16orf86Q6ZW13 317 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 CCDC17Q96LX7 622 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 LRRCC1Q9C099 1032 aa20.13■□□□□ 0.81
TRIM13-208ENST00000478111 OLFML2BQ68BL8 750 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 CTR9Q6PD62 1173 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 DPP9Q86TI2 863 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 MB21D1Q8N884 522 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 ATG4CQ96DT6 458 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 ARHGEF10LQ9HCE6 1279 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 SLC4A4Q9Y6R1 1079 aa20.12■□□□□ 0.81
TRIM13-208ENST00000478111 MSCO60682 206 aa20.11■□□□□ 0.81
TRIM13-208ENST00000478111 FLOT1O75955 427 aa20.11■□□□□ 0.81
TRIM13-208ENST00000478111 CNGA1P29973 690 aa20.11■□□□□ 0.81
TRIM13-208ENST00000478111 ADAMTS5Q9UNA0 930 aa20.11■□□□□ 0.81
TRIM13-208ENST00000478111 PLXNA1Q9UIW2 1896 aa20.11■□□□□ 0.81
TRIM13-208ENST00000478111 WDR46O15213 610 aaKnown RBP20.1■□□□□ 0.81
TRIM13-208ENST00000478111 EEF2P13639 858 aaKnown RBP20.1■□□□□ 0.81
TRIM13-208ENST00000478111 LRIT3Q3SXY7 679 aa20.1■□□□□ 0.81
TRIM13-208ENST00000478111 TDHQ8IZJ6 230 aa20.1■□□□□ 0.81
TRIM13-208ENST00000478111 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRIM13-208ENST00000478111 SENP6Q9GZR1 1112 aaPredicted RBP20.1■□□□□ 0.81
TRIM13-208ENST00000478111 MROH8Q9H579 483 aa20.1■□□□□ 0.81
TRIM13-208ENST00000478111 SH2D4AQ9H788 454 aa20.1■□□□□ 0.81
TRIM13-208ENST00000478111 TMEM132BQ14DG7 1078 aa20.09■□□□□ 0.81
TRIM13-208ENST00000478111 ZSCAN25Q6NSZ9 544 aa20.09■□□□□ 0.81
TRIM13-208ENST00000478111 GPR153Q6NV75 609 aa20.09■□□□□ 0.81
TRIM13-208ENST00000478111 ABRAQ8N0Z2 381 aa20.09■□□□□ 0.81
TRIM13-208ENST00000478111 STRBPQ96SI9 672 aaKnown RBP20.09■□□□□ 0.81
TRIM13-208ENST00000478111 FBXO28Q9NVF7 368 aa20.09■□□□□ 0.81
TRIM13-208ENST00000478111 DNM1LO00429 736 aa20.08■□□□□ 0.81
TRIM13-208ENST00000478111 PLS1Q14651 629 aa20.08■□□□□ 0.81
TRIM13-208ENST00000478111 NCAPG2Q86XI2 1143 aa20.08■□□□□ 0.81
TRIM13-208ENST00000478111 AMOTL1Q8IY63 956 aa20.08■□□□□ 0.81
TRIM13-208ENST00000478111 UBE2OQ9C0C9 1292 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms