RNA–Protein interactions for RNA: ENST00000472822.5

KDM5B-207, Transcript of lysine demethylase 5B, humanhuman

TSL 1 (best)

Gene KDM5B, Length 1,648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5B-207ENST00000472822 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
KDM5B-207ENST00000472822 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 SNHG28P0DPA3 235 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 IFNAR1P17181 557 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 KIAA1755Q5JYT7 1200 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 SYNE3Q6ZMZ3 975 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 TMTC3Q6ZXV5 915 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 USP48Q86UV5 1035 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 ACER1Q8TDN7 264 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 SHISA4Q96DD7 197 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 AIFM3Q96NN9 605 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 MAP3K14Q99558 947 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 GLIS2Q9BZE0 524 aaPredicted RBP10.67□□□□□ -0.7
KDM5B-207ENST00000472822 RRAGCQ9HB90 399 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
KDM5B-207ENST00000472822 PAPPA2Q9BXP8 1791 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 IQCA1LA6NCM1 817 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CYTH3O43739 400 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 USP2O75604 605 aaPredicted RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 BRD1O95696 1058 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CALM1P0DP23 149 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CALM2P0DP24 149 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CALM3P0DP25 149 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 PDHBP11177 359 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 VEGFAP15692 232 aaPredicted RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 ECE1P42892 770 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 ICA1Q05084 483 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 FMR1Q06787 632 aaKnown RBP eCLIP10.66□□□□□ -0.73e-6■■□□□ 12.4
KDM5B-207ENST00000472822 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 EAPPQ56P03 285 aaPredicted RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 USP17L2Q6R6M4 530 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 KRT26Q7Z3Y9 468 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CCDC82Q8N4S0 544 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CPVLQ9H3G5 476 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 NMRK2Q9NPI5 230 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 MTMR7Q9Y216 660 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 MTMR6Q9Y217 621 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 DHX16O60231 1041 aaKnown RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 FMNL1O95466 1100 aaPredicted RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 ATP2B2Q01814 1243 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 PPP2R5BQ15173 497 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 PKN1Q16512 942 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 SULF1Q8IWU6 871 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 KLRG1Q96E93 195 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CHAMP1Q96JM3 812 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 ZNF341Q9BYN7 854 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CABP5Q9NP86 173 aa10.66□□□□□ -0.7
KDM5B-207ENST00000472822 ORC3Q9UBD5 711 aaPredicted RBP10.66□□□□□ -0.7
KDM5B-207ENST00000472822 CNTNAP5Q8WYK1 1306 aa10.65□□□□□ -0.7
KDM5B-207ENST00000472822 hCG_1642624A0A1W2PR95 340 aa10.65□□□□□ -0.7
KDM5B-207ENST00000472822 CPLX1O14810 134 aa10.65□□□□□ -0.7
KDM5B-207ENST00000472822 CTNND1O60716 968 aaKnown RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 HMGN5P82970 282 aaKnown RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 LARP1BQ659C4 914 aaKnown RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 OTUD7BQ6GQQ9 843 aa10.65□□□□□ -0.7
KDM5B-207ENST00000472822 TTBK2Q6IQ55 1244 aa10.65□□□□□ -0.7
KDM5B-207ENST00000472822 PNMA8AQ86V59 439 aaPredicted RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 FOXD4L4Q8WXT5 416 aaPredicted RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
KDM5B-207ENST00000472822 RBM28Q9NW13 759 aaKnown RBP10.65□□□□□ -0.7
KDM5B-207ENST00000472822 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.71
KDM5B-207ENST00000472822 DOCK1Q14185 1865 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 F5H6K3 240 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 STX6O43752 255 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 FOSBP53539 338 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 KLRC3Q07444 240 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 PRKG1Q13976 671 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 SUPT20HL1Q3ZLR7 823 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 DCAF15Q66K64 600 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 MAP1SQ66K74 1059 aaPredicted RBP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 CDC37L1Q7L3B6 337 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 TNPO1Q92973 898 aaKnown RBP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 SLC26A6Q9BXS9 759 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 TMX2Q9Y320 296 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 V9GY48 417 aaPredicted RBP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 FRMPD2Q68DX3 1309 aaPredicted RBP10.64□□□□□ -0.71
KDM5B-207ENST00000472822 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 MYH6P13533 1939 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 OTOFQ9HC10 1997 aa10.64□□□□□ -0.71
KDM5B-207ENST00000472822 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 TRAF5O00463 557 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 PRPF3O43395 683 aaKnown RBP10.63□□□□□ -0.71
KDM5B-207ENST00000472822 NDUFB10O96000 172 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 ASNSP08243 561 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
KDM5B-207ENST00000472822 NUCB2P80303 420 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 SSRP1Q08945 709 aaKnown RBP10.63□□□□□ -0.71
KDM5B-207ENST00000472822 ZNF543Q08ER8 600 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 DGKZQ13574 1117 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 SLFN13Q68D06 897 aa10.63□□□□□ -0.71
KDM5B-207ENST00000472822 GMCL1P1Q8NEA9 526 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms