RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 RNF181Q9P0P0 153 aa16.9■□□□□ 0.3
HIF3A-206ENST00000472815 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 GOLGA6L4A6NEF3 574 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 H7C1D1 291 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 KIF23Q02241 960 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-206ENST00000472815 FUT2Q10981 343 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 ASPRV1Q53RT3 343 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
HIF3A-206ENST00000472815 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 MICALL2Q8IY33 904 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 FAM177A1Q8N128 213 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-206ENST00000472815 CMTR1Q8N1G2 835 aaKnown RBP16.89■□□□□ 0.29
HIF3A-206ENST00000472815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.89■□□□□ 0.29
HIF3A-206ENST00000472815 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
HIF3A-206ENST00000472815 V9GY48 417 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-206ENST00000472815 PALM3A6NDB9 673 aaPredicted RBP16.88■□□□□ 0.29
HIF3A-206ENST00000472815 MMP1P03956 469 aa16.88■□□□□ 0.29
HIF3A-206ENST00000472815 ABCB5Q2M3G0 1257 aa16.88■□□□□ 0.29
HIF3A-206ENST00000472815 GPC2Q8N158 579 aa16.88■□□□□ 0.29
HIF3A-206ENST00000472815 SRBD1Q8N5C6 995 aaKnown RBP16.88■□□□□ 0.29
HIF3A-206ENST00000472815 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
HIF3A-206ENST00000472815 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.88■□□□□ 0.29
HIF3A-206ENST00000472815 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
HIF3A-206ENST00000472815 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
HIF3A-206ENST00000472815 CNOT7Q9UIV1 285 aaKnown RBP16.88■□□□□ 0.29
HIF3A-206ENST00000472815 TBC1D12O60347 775 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 SPZ1Q9BXG8 430 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 FOXP1Q9H334 677 aaPredicted RBP16.87■□□□□ 0.29
HIF3A-206ENST00000472815 NYAP2Q9P242 653 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
HIF3A-206ENST00000472815 CNTNAP1P78357 1384 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 SCG2P13521 617 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
HIF3A-206ENST00000472815 GSE1Q14687 1217 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 NBPF9Q3BBW0 867 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 GPATCH4Q5T3I0 446 aaKnown RBP16.87■□□□□ 0.29
HIF3A-206ENST00000472815 FAM173BQ6P4H8 233 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 SH3GLB2Q9NR46 395 aa16.87■□□□□ 0.29
HIF3A-206ENST00000472815 KLRF2D3W0D1 207 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 PFKFB3Q16875 520 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-206ENST00000472815 MYSM1Q5VVJ2 828 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
HIF3A-206ENST00000472815 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
HIF3A-206ENST00000472815 SYNPO2Q9UMS6 1093 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 MTMR7Q9Y216 660 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
HIF3A-206ENST00000472815 ICA1Q05084 483 aa16.85■□□□□ 0.29
HIF3A-206ENST00000472815 PKN1Q16512 942 aa16.85■□□□□ 0.29
HIF3A-206ENST00000472815 KIF4BQ2VIQ3 1234 aa16.85■□□□□ 0.29
HIF3A-206ENST00000472815 DIS3L2Q8IYB7 885 aaKnown RBP16.85■□□□□ 0.29
HIF3A-206ENST00000472815 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
HIF3A-206ENST00000472815 CCDC12Q8WUD4 166 aaPredicted RBP16.85■□□□□ 0.29
HIF3A-206ENST00000472815 MKL1Q969V6 931 aa16.85■□□□□ 0.29
HIF3A-206ENST00000472815 HOOK2Q96ED9 719 aa16.85■□□□□ 0.29
HIF3A-206ENST00000472815 SEC63Q9UGP8 760 aaKnown RBP16.85■□□□□ 0.29
HIF3A-206ENST00000472815 FAM196BA6NMK8 535 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 PDHBP11177 359 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 CALML3P27482 149 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 KRT2P35908 639 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 NOSTRINQ8IVI9 506 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
HIF3A-206ENST00000472815 STAG2Q8N3U4 1231 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 GPT2Q8TD30 523 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 RRP36Q96EU6 259 aaKnown RBP16.84■□□□□ 0.29
HIF3A-206ENST00000472815 GJB4Q9NTQ9 266 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 POLR3EQ9NVU0 708 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 RTEL1Q9NZ71 1219 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 hCG_1984214I3L0E3 225 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 YEATS4O95619 227 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 SNHG28P0DPA3 235 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
HIF3A-206ENST00000472815 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
HIF3A-206ENST00000472815 ZNF713Q8N859 430 aaPredicted RBP16.84■□□□□ 0.29
HIF3A-206ENST00000472815 KCNG4Q8TDN1 519 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 PHF20Q9BVI0 1012 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 TMEM39BQ9GZU3 492 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
HIF3A-206ENST00000472815 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
HIF3A-206ENST00000472815 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.28
HIF3A-206ENST00000472815 RILPL1Q5EBL4 403 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 GALNT17Q6IS24 598 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 USP17L2Q6R6M4 530 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 DCAF4Q8WV16 495 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 ARHGEF10LQ9HCE6 1279 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 GPRC5DQ9NZD1 345 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.28
HIF3A-206ENST00000472815 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
HIF3A-206ENST00000472815 USP17L5A8MUK1 530 aa16.82■□□□□ 0.28
HIF3A-206ENST00000472815 KIF28PB7ZC32 967 aa16.82■□□□□ 0.28
HIF3A-206ENST00000472815 GDF11O95390 407 aa16.82■□□□□ 0.28
HIF3A-206ENST00000472815 GH2P01242 217 aa16.82■□□□□ 0.28
HIF3A-206ENST00000472815 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
HIF3A-206ENST00000472815 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
HIF3A-206ENST00000472815 NLRP5P59047 1200 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms