RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 MCM9Q9NXL9 1143 aa12.28□□□□□ -0.44
SCAMP3-205ENST00000472397 NOP58Q9Y2X3 529 aaKnown RBP12.28□□□□□ -0.44
SCAMP3-205ENST00000472397 FOCADQ5VW36 1801 aa12.27□□□□□ -0.44
SCAMP3-205ENST00000472397 COL6A3P12111 3177 aa12.27□□□□□ -0.44
SCAMP3-205ENST00000472397 GOLIM4O00461 696 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 COBLO75128 1261 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 ADORA2AP29274 412 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 USP14P54578 494 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 HNRNPUQ00839 825 aaKnown RBP eCLIP12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 C9orf50Q5SZB4 431 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 SLC9C2Q5TAH2 1124 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 SH3RF1Q7Z6J0 888 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 NCAPG2Q86XI2 1143 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 ZNF512BQ96KM6 892 aaPredicted RBP12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 C12orf42Q96LP6 360 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 GUCD1Q96NT3 240 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 KIAA1683Q9H0B3 1180 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 ZNF532Q9HCE3 1301 aa12.27□□□□□ -0.45
SCAMP3-205ENST00000472397 AKR1B1P15121 316 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 PDE6AP16499 860 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 CAPN2P17655 700 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 ERCC3P19447 782 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 ADCYAP1R1P41586 468 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 GRB14Q14449 540 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 SHHQ15465 462 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 TRIM60Q495X7 471 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 GTF3C2Q8WUA4 911 aaPredicted RBP12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 LENG1Q96BZ8 264 aaPredicted RBP12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 ATG4CQ96DT6 458 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 GINM1Q9NU53 330 aa12.26□□□□□ -0.45
SCAMP3-205ENST00000472397 CCER2I3L3R5 266 aa12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 COG2Q14746 738 aa12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 BADQ92934 168 aa12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 CHMP4CQ96CF2 233 aa12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 COL25A1Q9BXS0 654 aaPredicted RBP12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 EHD4Q9H223 541 aa12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 FBXO28Q9NVF7 368 aa12.25□□□□□ -0.45
SCAMP3-205ENST00000472397 FLOT1O75955 427 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 MBD4O95243 580 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 PGK2P07205 417 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 CYBAP13498 195 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 FRMPD3Q5JV73 1810 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 LBX2Q6XYB7 198 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 SLC39A5Q6ZMH5 540 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 SIAH1Q8IUQ4 282 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 LPAR1Q92633 364 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 CRNKL1Q9BZJ0 848 aaKnown RBP12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 SPATC1LQ9H0A9 340 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 PRKAG2Q9UGJ0 569 aa12.24□□□□□ -0.45
SCAMP3-205ENST00000472397 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 KBTBD13C9JR72 458 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 DNM1LO00429 736 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 GABPAQ06546 454 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 RHPN1Q8TCX5 695 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 MYLIPQ8WY64 445 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 NUP88Q99567 741 aaPredicted RBP12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 NAV1Q8NEY1 1877 aa12.23□□□□□ -0.45
SCAMP3-205ENST00000472397 TCRBV5S4A2TA0A5A2 114 aa12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 PGK1P00558 417 aa12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 DSG3P32926 999 aa12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 TMEM132BQ14DG7 1078 aa12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 HOXC10Q9NYD6 342 aa12.22□□□□□ -0.45
SCAMP3-205ENST00000472397 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 SMARCA5O60264 1052 aaPredicted RBP12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 HOXC6P09630 235 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 IFIT2P09913 472 aaKnown RBP12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 ITGB8P26012 769 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 EPHB4P54760 987 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 TLE2Q04725 743 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 ICA1Q05084 483 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 LRRC41Q15345 812 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 GPR153Q6NV75 609 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 MMP19Q99542 508 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 CDX2Q99626 313 aaPredicted RBP12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
SCAMP3-205ENST00000472397 USP17L12C9JPN9 530 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 USP17L21D6R901 530 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 PQBP1O60828 265 aaKnown RBP12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 EEF2P13639 858 aaKnown RBP12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 CDK8P49336 464 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 SIRT2Q8IXJ6 389 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 MIER1Q8N108 512 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 ARRDC4Q8NCT1 418 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 MAML3Q96JK9 1138 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
SCAMP3-205ENST00000472397 A0A0C4DFX4 3053 aa12.19□□□□□ -0.46
SCAMP3-205ENST00000472397 SEPT4O43236 478 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms