RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 ABCC11Q96J66 1382 aa8.67□□□□□ -1.02
GTF2B-204ENST00000471296 EMILIN2Q9BXX0 1053 aa8.67□□□□□ -1.02
GTF2B-204ENST00000471296 ALKQ9UM73 1620 aa8.67□□□□□ -1.02
GTF2B-204ENST00000471296 U3KQE9 123 aa8.67□□□□□ -1.02
GTF2B-204ENST00000471296 LAMC1P11047 1609 aa8.66□□□□□ -1.02
GTF2B-204ENST00000471296 TECPR2O15040 1411 aa8.66□□□□□ -1.02
GTF2B-204ENST00000471296 FLCNQ8NFG4 579 aa8.66□□□□□ -1.02
GTF2B-204ENST00000471296 SIN3AQ96ST3 1273 aa8.66□□□□□ -1.02
GTF2B-204ENST00000471296 KRTAP4-12Q9BQ66 201 aa8.66□□□□□ -1.02
GTF2B-204ENST00000471296 PPLO60437 1756 aa8.66□□□□□ -1.02
GTF2B-204ENST00000471296 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 DCCP43146 1447 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 PTPRUQ92729 1446 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 ATP2B2Q01814 1243 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 CYP27C1Q4G0S4 372 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 SRCIN1Q9C0H9 1055 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 SSU72Q9NP77 194 aaKnown RBP8.65□□□□□ -1.02
GTF2B-204ENST00000471296 CACNA2D2Q9NY47 1150 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 PCOLCE2Q9UKZ9 415 aa8.65□□□□□ -1.02
GTF2B-204ENST00000471296 FAM135BQ49AJ0 1406 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 YTHDC2Q9H6S0 1430 aaKnown RBP8.64□□□□□ -1.03
GTF2B-204ENST00000471296 DCDC2CA8MYV0 355 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 PAX4O43316 350 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 CELA3AP09093 270 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 HNRNPUQ00839 825 aaKnown RBP eCLIP8.64□□□□□ -1.03
GTF2B-204ENST00000471296 PPM1JQ5JR12 505 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 ZNF574Q6ZN55 896 aaPredicted RBP8.64□□□□□ -1.03
GTF2B-204ENST00000471296 PLD6Q8N2A8 252 aaKnown RBP8.64□□□□□ -1.03
GTF2B-204ENST00000471296 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 CEP44Q9C0F1 390 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 C19orf44Q9H6X5 657 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
GTF2B-204ENST00000471296 MYO5BQ9ULV0 1848 aa8.64□□□□□ -1.03
GTF2B-204ENST00000471296 ADGRL3Q9HAR2 1447 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 LDHBP07195 334 aaKnown RBP8.63□□□□□ -1.03
GTF2B-204ENST00000471296 USP17L7P0C7H9 530 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 ATF3P18847 181 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 ERVK-24P63145 666 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 UBE3DQ7Z6J8 389 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 C12orf40Q86WS4 652 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
GTF2B-204ENST00000471296 RNF214Q8ND24 703 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 DUSP23Q9BVJ7 150 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 PPM1HQ9ULR3 514 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 XRN1Q8IZH2 1706 aaKnown RBP8.63□□□□□ -1.03
GTF2B-204ENST00000471296 IFT172Q9UG01 1749 aa8.63□□□□□ -1.03
GTF2B-204ENST00000471296 GIPC1O14908 333 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 BNIP3Q12983 259 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 TMEM132EQ6IEE7 984 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 LLGL2Q6P1M3 1020 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 SPRED2Q7Z698 418 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 WFDC3Q8IUB2 231 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 TOP6BLQ8N6T0 577 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
GTF2B-204ENST00000471296 RNF19AQ9NV58 838 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 STK26Q9P289 416 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 DLC1Q96QB1 1528 aa8.62□□□□□ -1.03
GTF2B-204ENST00000471296 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
GTF2B-204ENST00000471296 ROBO2Q9HCK4 1378 aa8.61□□□□□ -1.03
GTF2B-204ENST00000471296 NTF4P34130 210 aa8.61□□□□□ -1.03
GTF2B-204ENST00000471296 PCNX4Q63HM2 1172 aa8.61□□□□□ -1.03
GTF2B-204ENST00000471296 POGKQ9P215 609 aa8.61□□□□□ -1.03
GTF2B-204ENST00000471296 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
GTF2B-204ENST00000471296 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
GTF2B-204ENST00000471296 ROCK2O75116 1388 aaKnown RBP8.61□□□□□ -1.03
GTF2B-204ENST00000471296 ASXL1Q8IXJ9 1541 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 TRIM37O94972 964 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 PTPN11Q06124 597 aaPredicted RBP8.6□□□□□ -1.03
GTF2B-204ENST00000471296 CBLL1Q75N03 491 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 PICK1Q9NRD5 415 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 FAM8A1Q9UBU6 413 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 PCDHA4Q9UN74 947 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 SLC5A6Q9Y289 635 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 RNF114Q9Y508 228 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 GPRASP1Q5JY77 1395 aa8.6□□□□□ -1.03
GTF2B-204ENST00000471296 CD96P40200 585 aa8.59□□□□□ -1.03
GTF2B-204ENST00000471296 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
GTF2B-204ENST00000471296 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.03
GTF2B-204ENST00000471296 PRAM1Q96QH2 718 aa8.59□□□□□ -1.03
GTF2B-204ENST00000471296 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
GTF2B-204ENST00000471296 SETD1AO15047 1707 aaKnown RBP8.58□□□□□ -1.04
GTF2B-204ENST00000471296 RING1Q06587 406 aa8.58□□□□□ -1.04
GTF2B-204ENST00000471296 LRRC14Q15048 493 aa8.58□□□□□ -1.04
GTF2B-204ENST00000471296 KRTAP1-3Q8IUG1 177 aa8.58□□□□□ -1.04
GTF2B-204ENST00000471296 NETO1Q8TDF5 533 aa8.58□□□□□ -1.04
GTF2B-204ENST00000471296 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
GTF2B-204ENST00000471296 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 OXCT1P55809 520 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 INPP5AQ14642 412 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 WAPLQ7Z5K2 1190 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 AGBL5Q8NDL9 886 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 ANKRD24Q8TF21 1146 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 HEXIM2Q96MH2 286 aaKnown RBP8.57□□□□□ -1.04
GTF2B-204ENST00000471296 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
GTF2B-204ENST00000471296 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms