RNA–Protein interactions for RNA: ENST00000471296.5

GTF2B-204, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-204ENST00000471296 AEBP2Q6ZN18 517 aaPredicted RBP30.73■■■□□ 2.51
GTF2B-204ENST00000471296 CHIC1Q5VXU3 224 aa29.48■■■□□ 2.31
GTF2B-204ENST00000471296 SENP3Q9H4L4 574 aaPredicted RBP26.04■■□□□ 1.76
GTF2B-204ENST00000471296 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
GTF2B-204ENST00000471296 FOXD1Q16676 465 aa24.31■■□□□ 1.48
GTF2B-204ENST00000471296 PLPPR3Q6T4P5 718 aa23.7■■□□□ 1.38
GTF2B-204ENST00000471296 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
GTF2B-204ENST00000471296 ADRA2BP18089 450 aa23.01■■□□□ 1.27
GTF2B-204ENST00000471296 PIAS4Q8N2W9 510 aaPredicted RBP22.78■■□□□ 1.24
GTF2B-204ENST00000471296 MSH5O43196 834 aa22.51■■□□□ 1.19
GTF2B-204ENST00000471296 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
GTF2B-204ENST00000471296 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
GTF2B-204ENST00000471296 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
GTF2B-204ENST00000471296 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
GTF2B-204ENST00000471296 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
GTF2B-204ENST00000471296 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
GTF2B-204ENST00000471296 HOXD11P31277 338 aaPredicted RBP20.11■□□□□ 0.81
GTF2B-204ENST00000471296 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
GTF2B-204ENST00000471296 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
GTF2B-204ENST00000471296 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
GTF2B-204ENST00000471296 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
GTF2B-204ENST00000471296 KCNA4P22459 653 aa19.89■□□□□ 0.77
GTF2B-204ENST00000471296 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
GTF2B-204ENST00000471296 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
GTF2B-204ENST00000471296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.66
GTF2B-204ENST00000471296 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
GTF2B-204ENST00000471296 C1QBPQ07021 282 aaKnown RBP18.97■□□□□ 0.63
GTF2B-204ENST00000471296 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
GTF2B-204ENST00000471296 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
GTF2B-204ENST00000471296 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
GTF2B-204ENST00000471296 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
GTF2B-204ENST00000471296 CAPN15O75808 1086 aa18.42■□□□□ 0.54
GTF2B-204ENST00000471296 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
GTF2B-204ENST00000471296 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
GTF2B-204ENST00000471296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
GTF2B-204ENST00000471296 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
GTF2B-204ENST00000471296 ZBTB22O15209 634 aa18.32■□□□□ 0.52
GTF2B-204ENST00000471296 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
GTF2B-204ENST00000471296 APLP2Q06481 763 aa18.24■□□□□ 0.51
GTF2B-204ENST00000471296 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
GTF2B-204ENST00000471296 DSG3P32926 999 aa18.2■□□□□ 0.5
GTF2B-204ENST00000471296 ZNF219Q9P2Y4 722 aaPredicted RBP18.12■□□□□ 0.49
GTF2B-204ENST00000471296 ABCB7O75027 752 aa18.07■□□□□ 0.48
GTF2B-204ENST00000471296 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
GTF2B-204ENST00000471296 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
GTF2B-204ENST00000471296 POLA2Q14181 598 aa17.81■□□□□ 0.44
GTF2B-204ENST00000471296 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
GTF2B-204ENST00000471296 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
GTF2B-204ENST00000471296 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
GTF2B-204ENST00000471296 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
GTF2B-204ENST00000471296 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
GTF2B-204ENST00000471296 MKRN4PQ13434 485 aaPredicted RBP17.17■□□□□ 0.34
GTF2B-204ENST00000471296 FBLN2P98095 1184 aa17.16■□□□□ 0.34
GTF2B-204ENST00000471296 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
GTF2B-204ENST00000471296 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
GTF2B-204ENST00000471296 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
GTF2B-204ENST00000471296 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
GTF2B-204ENST00000471296 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
GTF2B-204ENST00000471296 POTEHQ6S545 545 aa16.83■□□□□ 0.28
GTF2B-204ENST00000471296 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
GTF2B-204ENST00000471296 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
GTF2B-204ENST00000471296 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
GTF2B-204ENST00000471296 PITPNM1O00562 1244 aa16.72■□□□□ 0.27
GTF2B-204ENST00000471296 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
GTF2B-204ENST00000471296 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
GTF2B-204ENST00000471296 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
GTF2B-204ENST00000471296 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
GTF2B-204ENST00000471296 PIP4P2Q8N4L2 257 aa16.52■□□□□ 0.24
GTF2B-204ENST00000471296 FXR2P51116 673 aaKnown RBP eCLIP16.46■□□□□ 0.23
GTF2B-204ENST00000471296 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
GTF2B-204ENST00000471296 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
GTF2B-204ENST00000471296 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
GTF2B-204ENST00000471296 PROM2Q8N271 834 aa16.14■□□□□ 0.17
GTF2B-204ENST00000471296 STAG3Q9UJ98 1225 aa16.13■□□□□ 0.17
GTF2B-204ENST00000471296 HAX1O00165 279 aa16.12■□□□□ 0.17
GTF2B-204ENST00000471296 FKBP8Q14318 412 aa16.12■□□□□ 0.17
GTF2B-204ENST00000471296 EVX2Q03828 476 aa16.02■□□□□ 0.16
GTF2B-204ENST00000471296 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
GTF2B-204ENST00000471296 FARP1Q9Y4F1 1045 aaPredicted RBP15.97■□□□□ 0.15
GTF2B-204ENST00000471296 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
GTF2B-204ENST00000471296 C19orf67A6NJJ6 358 aa15.92■□□□□ 0.14
GTF2B-204ENST00000471296 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
GTF2B-204ENST00000471296 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
GTF2B-204ENST00000471296 MIER1Q8N108 512 aa15.72■□□□□ 0.11
GTF2B-204ENST00000471296 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
GTF2B-204ENST00000471296 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
GTF2B-204ENST00000471296 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
GTF2B-204ENST00000471296 GABBR2O75899 941 aa15.61■□□□□ 0.09
GTF2B-204ENST00000471296 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
GTF2B-204ENST00000471296 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
GTF2B-204ENST00000471296 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
GTF2B-204ENST00000471296 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
GTF2B-204ENST00000471296 PHF12Q96QT6 1004 aa15.48■□□□□ 0.07
GTF2B-204ENST00000471296 TSPYL2Q9H2G4 693 aaPredicted RBP15.48■□□□□ 0.07
GTF2B-204ENST00000471296 VASPP50552 380 aaPredicted RBP15.44■□□□□ 0.06
GTF2B-204ENST00000471296 RASEFQ8IZ41 740 aa15.44■□□□□ 0.06
GTF2B-204ENST00000471296 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
GTF2B-204ENST00000471296 GALR2O43603 387 aaPredicted RBP15.37■□□□□ 0.05
GTF2B-204ENST00000471296 NUBP1P53384 320 aa15.37■□□□□ 0.05
GTF2B-204ENST00000471296 CLCN6P51797 869 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms