RNA–Protein interactions for RNA: ENST00000471292.5

NDUFA3-210, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-210ENST00000471292 CHAMP1Q96JM3 812 aa13.05□□□□□ -0.32
NDUFA3-210ENST00000471292 TMEM39BQ9GZU3 492 aa13.05□□□□□ -0.32
NDUFA3-210ENST00000471292 ZSCAN16Q9H4T2 348 aaPredicted RBP13.05□□□□□ -0.32
NDUFA3-210ENST00000471292 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
NDUFA3-210ENST00000471292 CNTNAP5Q8WYK1 1306 aa13.05□□□□□ -0.32
NDUFA3-210ENST00000471292 MYH8P13535 1937 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 MPHOSPH10O00566 681 aaKnown RBP13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 RASA3Q14644 834 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 RRP1BQ14684 758 aaKnown RBP13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 ABCB5Q2M3G0 1257 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 COL13A1Q5TAT6 717 aaPredicted RBP13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 AIFM3Q96NN9 605 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
NDUFA3-210ENST00000471292 UBE2Q2LH0YL09 131 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 CAPN15O75808 1086 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 GUCY1B3Q02153 619 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 PKN1Q16512 942 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 SHROOM1Q2M3G4 852 aaPredicted RBP13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 KRT40Q6A162 431 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 CLEC10AQ8IUN9 316 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 CCDC82Q8N4S0 544 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 TMEM87AQ8NBN3 555 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 TRPM4Q8TD43 1214 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 MKL1Q969V6 931 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 LMBRD1Q9NUN5 540 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
NDUFA3-210ENST00000471292 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 GDF11O95390 407 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 JAG1P78504 1218 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 TRIM29Q14134 588 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 SEPT2Q15019 361 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 SLC35G1Q2M3R5 365 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 SIAH1Q8IUQ4 282 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
NDUFA3-210ENST00000471292 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 GH2P01242 217 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 PDHBP11177 359 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 EPS15P42566 896 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 HTRA3P83110 453 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 KIF23Q02241 960 aaPredicted RBP13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 ICA1Q05084 483 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 SYNPO2Q9UMS6 1093 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
NDUFA3-210ENST00000471292 KLRF2D3W0D1 207 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
NDUFA3-210ENST00000471292 MMP1P03956 469 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
NDUFA3-210ENST00000471292 KRT85P78386 507 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 ZNF543Q08ER8 600 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
NDUFA3-210ENST00000471292 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
NDUFA3-210ENST00000471292 ATL3Q6DD88 541 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 USP17L2Q6R6M4 530 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 BRAPQ7Z569 592 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 SHISA4Q96DD7 197 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 ADARB2Q9NS39 739 aaKnown RBP13□□□□□ -0.33
NDUFA3-210ENST00000471292 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 MTMR7Q9Y216 660 aa13□□□□□ -0.33
NDUFA3-210ENST00000471292 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 hCG_1642624A0A1W2PR95 340 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 KIF28PB7ZC32 967 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 CYTH3O43739 400 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 TRAK2O60296 914 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 SCG2P13521 617 aa12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
NDUFA3-210ENST00000471292 CAP2P40123 477 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms