RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 U2AF2P26368 475 aaKnown RBP eCLIP30.02■■■□□ 2.4
U2AF1-208ENST00000471250 FAM83AQ86UY5 434 aa30.02■■■□□ 2.4
U2AF1-208ENST00000471250 CSRNP1Q96S65 589 aa30.02■■■□□ 2.4
U2AF1-208ENST00000471250 MPHOSPH10O00566 681 aaKnown RBP30.01■■■□□ 2.4
U2AF1-208ENST00000471250 GMPSP49915 693 aaPredicted RBP30.01■■■□□ 2.4
U2AF1-208ENST00000471250 MYSM1Q5VVJ2 828 aa30.01■■■□□ 2.4
U2AF1-208ENST00000471250 CAVIN1Q6NZI2 390 aaKnown RBP30.01■■■□□ 2.4
U2AF1-208ENST00000471250 ARHGAP27Q6ZUM4 889 aa30.01■■■□□ 2.4
U2AF1-208ENST00000471250 USP28Q96RU2 1077 aa30.01■■■□□ 2.4
U2AF1-208ENST00000471250 VEZTQ9HBM0 779 aa30.01■■■□□ 2.4
U2AF1-208ENST00000471250 RCOR1Q9UKL0 485 aa30.01■■■□□ 2.4
U2AF1-208ENST00000471250 DICER1Q9UPY3 1922 aaKnown RBP30.01■■■□□ 2.39
U2AF1-208ENST00000471250 SAFBQ15424 915 aaKnown RBP eCLIP30.01■■■□□ 2.39
U2AF1-208ENST00000471250 CLIP2Q9UDT6 1046 aa30.01■■■□□ 2.39
U2AF1-208ENST00000471250 HERC5Q9UII4 1024 aaKnown RBP30.01■■■□□ 2.39
U2AF1-208ENST00000471250 KCNJ14Q9UNX9 436 aa30.01■■■□□ 2.39
U2AF1-208ENST00000471250 hCG_1642624A0A1W2PR95 340 aa30■■■□□ 2.39
U2AF1-208ENST00000471250 PARP1P09874 1014 aaKnown RBP30■■■□□ 2.39
U2AF1-208ENST00000471250 NBPF9Q3BBW0 867 aa30■■■□□ 2.39
U2AF1-208ENST00000471250 MTMR7Q9Y216 660 aa30■■■□□ 2.39
U2AF1-208ENST00000471250 GJA3Q9Y6H8 435 aa30■■■□□ 2.39
U2AF1-208ENST00000471250 GNL2Q13823 731 aaKnown RBP29.99■■■□□ 2.39
U2AF1-208ENST00000471250 PFKFB3Q16875 520 aaPredicted RBP29.99■■■□□ 2.39
U2AF1-208ENST00000471250 RTEL1Q9NZ71 1219 aa29.99■■■□□ 2.39
U2AF1-208ENST00000471250 ZNF541Q9H0D2 1346 aa29.99■■■□□ 2.39
U2AF1-208ENST00000471250 CLEC10AQ8IUN9 316 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 SHISA4Q96DD7 197 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 MYH4Q9Y623 1939 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 SCG2P13521 617 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 SMARCA1P28370 1054 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 MICALL2Q8IY33 904 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 DIS3L2Q8IYB7 885 aaKnown RBP29.98■■■□□ 2.39
U2AF1-208ENST00000471250 PHF20Q9BVI0 1012 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 FOXP1Q9H334 677 aaPredicted RBP29.98■■■□□ 2.39
U2AF1-208ENST00000471250 VPS54Q9P1Q0 977 aa29.98■■■□□ 2.39
U2AF1-208ENST00000471250 KLRF2D3W0D1 207 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 PDHBP11177 359 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 LMNB1P20700 586 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 SLC35G1Q2M3R5 365 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 TMEM179Q6ZVK1 233 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 LRRC47Q8N1G4 583 aaKnown RBP29.97■■■□□ 2.39
U2AF1-208ENST00000471250 SYT17Q9BSW7 474 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 SPZ1Q9BXG8 430 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 FTOQ9C0B1 505 aaKnown RBP eCLIP29.97■■■□□ 2.39
U2AF1-208ENST00000471250 KANSL2Q9H9L4 492 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.97■■■□□ 2.39
U2AF1-208ENST00000471250 TMEM63CQ9P1W3 806 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 NYAP2Q9P242 653 aa29.97■■■□□ 2.39
U2AF1-208ENST00000471250 CNOT7Q9UIV1 285 aaKnown RBP29.97■■■□□ 2.39
U2AF1-208ENST00000471250 USP17L5A8MUK1 530 aa29.96■■■□□ 2.39
U2AF1-208ENST00000471250 BTBD18B2RXH4 712 aa29.96■■■□□ 2.39
U2AF1-208ENST00000471250 SNHG28P0DPA3 235 aa29.96■■■□□ 2.39
U2AF1-208ENST00000471250 CEBPZQ03701 1054 aaKnown RBP29.96■■■□□ 2.39
U2AF1-208ENST00000471250 ABCB5Q2M3G0 1257 aa29.96■■■□□ 2.39
U2AF1-208ENST00000471250 USP17L2Q6R6M4 530 aa29.96■■■□□ 2.39
U2AF1-208ENST00000471250 MKL1Q969V6 931 aa29.96■■■□□ 2.39
U2AF1-208ENST00000471250 CYTH3O43739 400 aa29.95■■■□□ 2.39
U2AF1-208ENST00000471250 GOLGA8HP0CJ92 632 aa29.95■■■□□ 2.39
U2AF1-208ENST00000471250 RASGRP2Q7LDG7 609 aa29.95■■■□□ 2.39
U2AF1-208ENST00000471250 POLR3EQ9NVU0 708 aa29.95■■■□□ 2.39
U2AF1-208ENST00000471250 PGAP2Q9UHJ9 254 aa29.95■■■□□ 2.39
U2AF1-208ENST00000471250 SBF1O95248 1867 aa29.95■■■□□ 2.38
U2AF1-208ENST00000471250 ASPRV1Q53RT3 343 aa29.95■■■□□ 2.38
U2AF1-208ENST00000471250 ILDR2Q71H61 639 aa29.95■■■□□ 2.38
U2AF1-208ENST00000471250 NOSTRINQ8IVI9 506 aa29.95■■■□□ 2.38
U2AF1-208ENST00000471250 TMEM39BQ9GZU3 492 aa29.95■■■□□ 2.38
U2AF1-208ENST00000471250 TBC1D12O60347 775 aa29.94■■■□□ 2.38
U2AF1-208ENST00000471250 EGFRP00533 1210 aa29.94■■■□□ 2.38
U2AF1-208ENST00000471250 TNNI2P48788 182 aa29.94■■■□□ 2.38
U2AF1-208ENST00000471250 NASPP49321 788 aaPredicted RBP29.94■■■□□ 2.38
U2AF1-208ENST00000471250 SHROOM1Q2M3G4 852 aaPredicted RBP29.94■■■□□ 2.38
U2AF1-208ENST00000471250 RBM26Q5T8P6 1007 aaKnown RBP29.94■■■□□ 2.38
U2AF1-208ENST00000471250 PGBD1Q96JS3 809 aa29.94■■■□□ 2.38
U2AF1-208ENST00000471250 BAZ2BQ9UIF8 2168 aaKnown RBP29.93■■■□□ 2.38
U2AF1-208ENST00000471250 GDF11O95390 407 aa29.93■■■□□ 2.38
U2AF1-208ENST00000471250 YEATS4O95619 227 aa29.93■■■□□ 2.38
U2AF1-208ENST00000471250 SEPT2Q15019 361 aa29.93■■■□□ 2.38
U2AF1-208ENST00000471250 SYAP1Q96A49 352 aaPredicted RBP29.93■■■□□ 2.38
U2AF1-208ENST00000471250 CLIC4Q9Y696 253 aa29.93■■■□□ 2.38
U2AF1-208ENST00000471250 EEF2P13639 858 aaKnown RBP29.92■■■□□ 2.38
U2AF1-208ENST00000471250 RRP1BQ14684 758 aaKnown RBP29.92■■■□□ 2.38
U2AF1-208ENST00000471250 ZSCAN23Q3MJ62 389 aa29.92■■■□□ 2.38
U2AF1-208ENST00000471250 LINC00301Q8NCQ3 95 aa29.92■■■□□ 2.38
U2AF1-208ENST00000471250 PIBF1Q8WXW3 757 aa29.92■■■□□ 2.38
U2AF1-208ENST00000471250 SH3GLB2Q9NR46 395 aa29.92■■■□□ 2.38
U2AF1-208ENST00000471250 GOLGA6L4A6NEF3 574 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 KRT2P35908 639 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 ATP2B2Q01814 1243 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 ANO1Q5XXA6 986 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 SAMD7Q7Z3H4 446 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 CABP5Q9NP86 173 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 GOLGB1Q14789 3259 aaKnown RBP29.91■■■□□ 2.38
U2AF1-208ENST00000471250 TPRNQ4KMQ1 711 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 SIAH1Q8IUQ4 282 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 OXER1Q8TDS5 423 aa29.91■■■□□ 2.38
U2AF1-208ENST00000471250 VEGFAP15692 232 aaPredicted RBP29.9■■■□□ 2.38
U2AF1-208ENST00000471250 JAG1P78504 1218 aa29.9■■■□□ 2.38
U2AF1-208ENST00000471250 ICA1Q05084 483 aa29.9■■■□□ 2.38
U2AF1-208ENST00000471250 ZNF543Q08ER8 600 aa29.9■■■□□ 2.38
U2AF1-208ENST00000471250 TNFAIP1Q13829 316 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms