RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 ANKRD7Q92527 254 aa10.78□□□□□ -0.68
TOP3A-203ENST00000469739 C4AP0C0L4 1744 aa10.77□□□□□ -0.68
TOP3A-203ENST00000469739 C4BP0C0L5 1744 aa10.77□□□□□ -0.68
TOP3A-203ENST00000469739 TMCO4Q5TGY1 634 aa10.77□□□□□ -0.68
TOP3A-203ENST00000469739 RESP18Q5W5W9 173 aa10.77□□□□□ -0.68
TOP3A-203ENST00000469739 TMTC2Q8N394 836 aa10.77□□□□□ -0.68
TOP3A-203ENST00000469739 ANKRD2Q9GZV1 360 aa10.77□□□□□ -0.68
TOP3A-203ENST00000469739 A0A087X0B3 334 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 HSPA1LP34931 641 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 FANCCQ00597 558 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 GABPB1Q06547 395 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-203ENST00000469739 SPTLC3Q9NUV7 552 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 CHD4Q14839 1912 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 TRIM75PA6NK02 468 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 SERPINB2P05120 415 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 TSPY3P0CV98 308 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 TSPY8P0CW00 308 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 DOK7Q18PE1 504 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 SLC10A5Q5PT55 438 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 RASSF8Q8NHQ8 419 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 PSMD1Q99460 953 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 KAT14Q9H8E8 782 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 FBXO2Q9UK22 296 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-203ENST00000469739 SPATA31A6Q5VVP1 1343 aa10.77□□□□□ -0.69
TOP3A-203ENST00000469739 CUTAO60888 179 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 KRT2P35908 639 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 UBASH3AP57075 661 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 NCAPHQ15003 741 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 CPLX3Q8WVH0 158 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 CCDC66A2RUB6 948 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 PPP6R2O75170 966 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 XBP1P17861 261 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 SCNN1DP51172 638 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 GTF2IP78347 998 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 FMR1Q06787 632 aaKnown RBP eCLIP10.76□□□□□ -0.69
TOP3A-203ENST00000469739 PTGDRQ13258 359 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
TOP3A-203ENST00000469739 RILPL1Q5EBL4 403 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 MFSD14BQ5SR56 506 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-203ENST00000469739 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
TOP3A-203ENST00000469739 BRIP1Q9BX63 1249 aa10.76□□□□□ -0.69
TOP3A-203ENST00000469739 POSTNQ15063 836 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 PNMA1Q8ND90 353 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 IL17RBQ9NRM6 502 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 SAMSN1Q9NSI8 373 aaKnown RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 HPSEQ9Y251 543 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 PP2D1A8MPX8 630 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 BTDP43251 543 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 GRAPQ13588 217 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 TMTC3Q6ZXV5 915 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 GRAPLQ8TC17 118 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 ZBTB9Q96C00 473 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 NOL10Q9BSC4 688 aaKnown RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 PTPREP23469 700 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 RCSD1Q6JBY9 416 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 ARMCX5Q6P1M9 558 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 RNF26Q9BY78 433 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 FOXP1Q9H334 677 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 QTRT2Q9H974 415 aaKnown RBP10.75□□□□□ -0.69
TOP3A-203ENST00000469739 MAN1B1Q9UKM7 699 aa10.75□□□□□ -0.69
TOP3A-203ENST00000469739 GYS1P13807 737 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 TPM4P67936 248 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 FUT2Q10981 343 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 TEX11Q8IYF3 940 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 SMARCE1Q969G3 411 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 MRFAP1L1Q96HT8 127 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 BCCIPQ9P287 314 aaKnown RBP eCLIP10.74□□□□□ -0.69
TOP3A-203ENST00000469739 POLLQ9UGP5 575 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 NFE2L3Q9Y4A8 694 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 CARNS1A5YM72 827 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 FAM196BA6NMK8 535 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 TPM3P06753 285 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 SLFN14P0C7P3 912 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 CACNB3P54284 484 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 MYL5Q02045 173 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 SLC20A2Q08357 652 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 TTC38Q5R3I4 469 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 HSD3B7Q9H2F3 369 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 CD209Q9NNX6 404 aa10.74□□□□□ -0.69
TOP3A-203ENST00000469739 STK36Q9NRP7 1315 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 CTIFO43310 598 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 CAVIN2O95810 425 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 SFPQP23246 707 aaKnown RBP eCLIP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 TIGD1Q96MW7 591 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 ANAPC4Q9UJX5 808 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 FRMPD2Q68DX3 1309 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 FAM205AQ6ZU69 1335 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 CNTNAP5Q8WYK1 1306 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 SCG2P13521 617 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 ADKP55263 362 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 CCZ1BP86790 482 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 CCZ1P86791 482 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms