RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 TRIM29Q14134 588 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 KIF4BQ2VIQ3 1234 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 RBM26Q5T8P6 1007 aaKnown RBP17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 OTUD7BQ6GQQ9 843 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 SAMD7Q7Z3H4 446 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 BRAPQ7Z569 592 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 CCDC82Q8N4S0 544 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 GPRC5DQ9NZD1 345 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 CLIP2Q9UDT6 1046 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 V9GY48 417 aaPredicted RBP17.39■□□□□ 0.37
CRAMP1-206ENST00000468839 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 FOXD4L6Q3SYB3 417 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 FOXD4L3Q6VB84 417 aaPredicted RBP17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 TMEM39BQ9GZU3 492 aa17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 GJB4Q9NTQ9 266 aa17.38■□□□□ 0.37
CRAMP1-206ENST00000468839 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 PARP1P09874 1014 aaKnown RBP17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 PDHBP11177 359 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 XBP1P17861 261 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 RASA3Q14644 834 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 TEPSINQ96N21 525 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 RNF181Q9P0P0 153 aa17.37■□□□□ 0.37
CRAMP1-206ENST00000468839 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 MMP1P03956 469 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 SEPT2Q15019 361 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 PFKFB3Q16875 520 aaPredicted RBP17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 SIAH1Q8IUQ4 282 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 FAM177A1Q8N128 213 aaPredicted RBP17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 SYNPO2Q9UMS6 1093 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 ELP1O95163 1332 aa17.36■□□□□ 0.37
CRAMP1-206ENST00000468839 SCG2P13521 617 aa17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 EEF2P13639 858 aaKnown RBP17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 C9orf131Q5VYM1 1079 aa17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 APOBEC3FQ8IUX4 373 aaKnown RBP17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 RIOX1Q9H6W3 641 aa17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 GDPD2Q9HCC8 539 aa17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 SH3GLB2Q9NR46 395 aa17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 TFIP11Q9UBB9 837 aaKnown RBP17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
CRAMP1-206ENST00000468839 USP17L5A8MUK1 530 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 CYTH3O43739 400 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 GDF11O95390 407 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 MBD3O95983 291 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 GH2P01242 217 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 SCN4AP35499 1836 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 JAG1P78504 1218 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 DOCK1Q14185 1865 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 SLC35G1Q2M3R5 365 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 USP17L2Q6R6M4 530 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 LRRC47Q8N1G4 583 aaKnown RBP17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 FOXP1Q9H334 677 aaPredicted RBP17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 GINM1Q9NU53 330 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
CRAMP1-206ENST00000468839 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 FIBPO43427 364 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 EPS15P42566 896 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 ICA1Q05084 483 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 ZNF543Q08ER8 600 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 GPATCH4Q5T3I0 446 aaKnown RBP17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 CDAN1Q8IWY9 1227 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 TRPM4Q8TD43 1214 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 DCAF4Q8WV16 495 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 SHISA4Q96DD7 197 aa17.33■□□□□ 0.36
CRAMP1-206ENST00000468839 ZC3H4Q9UPT8 1303 aaKnown RBP17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 hCG_1642624A0A1W2PR95 340 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 GOLGA8HP0CJ92 632 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 CAP2P40123 477 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 HIRAP54198 1017 aaPredicted RBP17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 UBE2HP62256 183 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 GMCL1P1Q8NEA9 526 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 LEO1Q8WVC0 666 aaPredicted RBP17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 HOOK2Q96ED9 719 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms