RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 ASB3Q9Y575 518 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 NEK4P51957 841 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
LCA5-203ENST00000467898 E2F5Q15329 346 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 SESTD1Q86VW0 696 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 SH3GL2Q99962 352 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 NRDE2Q9H7Z3 1164 aa10.35□□□□□ -0.75
LCA5-203ENST00000467898 FIBPO43427 364 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 PHACTR2O75167 634 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 TMCC1O94876 653 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 HDAC4P56524 1084 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 USH1GQ495M9 461 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 NEK9Q8TD19 979 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 SENP2Q9HC62 589 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 ZNHIT6Q9NWK9 470 aaKnown RBP10.34□□□□□ -0.75
LCA5-203ENST00000467898 USP16Q9Y5T5 823 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 STXBP3O00186 592 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 STX6O43752 255 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 WHAMMP3Q1A5X7 153 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 OLFML1Q6UWY5 402 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 ZBTB8BQ8NAP8 495 aaPredicted RBP10.34□□□□□ -0.75
LCA5-203ENST00000467898 OPTNQ96CV9 577 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 ABCC6O95255 1503 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 OVOS2A0A0G2JMS6 1433 aa10.34□□□□□ -0.75
LCA5-203ENST00000467898 LRRD1A4D1F6 860 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 CAPN15O75808 1086 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 GSPT1P15170 499 aaKnown RBP10.33□□□□□ -0.76
LCA5-203ENST00000467898 CTCFP49711 727 aaPredicted RBP10.33□□□□□ -0.76
LCA5-203ENST00000467898 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
LCA5-203ENST00000467898 SGSM1Q2NKQ1 1148 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 LONRF3Q496Y0 759 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 NOL8Q76FK4 1167 aaKnown RBP10.33□□□□□ -0.76
LCA5-203ENST00000467898 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 RAD21O60216 631 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 GNPTABQ3T906 1256 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 WHAMMQ8TF30 809 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 MAIP1Q8WWC4 291 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 AGBL1Q96MI9 1066 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 LGR6Q9HBX8 967 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 NOP53Q9NZM5 478 aaKnown RBP10.33□□□□□ -0.76
LCA5-203ENST00000467898 RABL2BQ9UNT1 228 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 BZW2Q9Y6E2 419 aaKnown RBP10.33□□□□□ -0.76
LCA5-203ENST00000467898 PXDNLA1KZ92 1463 aa10.33□□□□□ -0.76
LCA5-203ENST00000467898 LRRIQ3A6PVS8 624 aaPredicted RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 GOLGA8KD6RF30 607 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 CUTAO60888 179 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 BCRP11274 1271 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 TRIM21P19474 475 aaKnown RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 HSPA4P34932 840 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 NLRP5P59047 1200 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 GNGT1P63211 74 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 MAK16Q9BXY0 300 aaKnown RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 LRRCC1Q9C099 1032 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 IQSEC3Q9UPP2 1182 aaPredicted RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 HMGB1P1B2RPK0 211 aaPredicted RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 FANCGO15287 622 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 EVI5O60447 810 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 WDHD1O75717 1129 aaPredicted RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 NEK2P51955 445 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 STX1AQ16623 288 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 PPP1R15BQ5SWA1 713 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 CEP85Q6P2H3 762 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 CCDC73Q6ZRK6 1079 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 CATIPQ7Z7H3 387 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 DDX17Q92841 729 aaKnown RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 TRAPPC9Q96Q05 1148 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 MEIS3Q99687 375 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 GALNT8Q9NY28 637 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 HPCAL4Q9UM19 191 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 ITM2BQ9Y287 266 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 SCN11AQ9UI33 1791 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 GOLGA8AA7E2F4 631 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 DNAJC8O75937 253 aaPredicted RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 HSPA2P54652 639 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 MRPS35P82673 323 aaKnown RBP10.32□□□□□ -0.76
LCA5-203ENST00000467898 MYO1EQ12965 1108 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 AKAP4Q5JQC9 854 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 SH2D4BQ5SQS7 431 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 KLHDC4Q8TBB5 520 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 TEKT4Q8WW24 435 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 AATFQ9NY61 560 aaKnown RBP eCLIP10.32□□□□□ -0.76
LCA5-203ENST00000467898 CROTQ9UKG9 612 aa10.32□□□□□ -0.76
LCA5-203ENST00000467898 TNS3Q68CZ2 1445 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 PALM3A6NDB9 673 aaPredicted RBP10.31□□□□□ -0.76
LCA5-203ENST00000467898 F6X3S4 739 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 ARMCX5Q6P1M9 558 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 PEX5LQ8IYB4 626 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms