RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 CPA4Q9UI42 421 aa16.11■□□□□ 0.17
SSBP1-206ENST00000467681 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
SSBP1-206ENST00000467681 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 VCAM1P19320 739 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 NOVP48745 357 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 COL13A1Q5TAT6 717 aaPredicted RBP16.1■□□□□ 0.17
SSBP1-206ENST00000467681 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 SYNPO2Q9UMS6 1093 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 PLIN4Q96Q06 1357 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 LAMB1P07942 1786 aa16.1■□□□□ 0.17
SSBP1-206ENST00000467681 CYP21A2P08686 494 aa16.09■□□□□ 0.17
SSBP1-206ENST00000467681 BCRP11274 1271 aa16.09■□□□□ 0.17
SSBP1-206ENST00000467681 GCLCP48506 637 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-206ENST00000467681 IRX3P78415 501 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-206ENST00000467681 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
SSBP1-206ENST00000467681 ESR2Q92731 530 aa16.09■□□□□ 0.17
SSBP1-206ENST00000467681 GOPCQ9HD26 462 aa16.09■□□□□ 0.17
SSBP1-206ENST00000467681 RBM8AQ9Y5S9 174 aaKnown RBP16.09■□□□□ 0.17
SSBP1-206ENST00000467681 PTPRFP10586 1907 aa16.09■□□□□ 0.17
SSBP1-206ENST00000467681 F5H6K3 240 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 NMT2O60551 498 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 KLRC3Q07444 240 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 COG2Q14746 738 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 SPICE1Q8N0Z3 855 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 ERO1AQ96HE7 468 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 TTC14Q96N46 770 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 KRT23Q9C075 422 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
SSBP1-206ENST00000467681 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 ANO2Q9NQ90 1003 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 HOXC10Q9NYD6 342 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
SSBP1-206ENST00000467681 KDM4AO75164 1064 aa16.07■□□□□ 0.16
SSBP1-206ENST00000467681 HERVK_113P62684 666 aa16.07■□□□□ 0.16
SSBP1-206ENST00000467681 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
SSBP1-206ENST00000467681 RBPJLQ9UBG7 517 aa16.07■□□□□ 0.16
SSBP1-206ENST00000467681 NEDD4P46934 1319 aa16.07■□□□□ 0.16
SSBP1-206ENST00000467681 MYH8P13535 1937 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 B4E1Z4 1266 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 WDR46O15213 610 aaKnown RBP16.06■□□□□ 0.16
SSBP1-206ENST00000467681 NDUFB10O96000 172 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 POTEEQ6S8J3 1075 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 GMCL1P1Q8NEA9 526 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
SSBP1-206ENST00000467681 ANKS1AQ92625 1134 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 STX8Q9UNK0 236 aa16.06■□□□□ 0.16
SSBP1-206ENST00000467681 E7EWF7 191 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 SLC27A2O14975 620 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 RAD21O60216 631 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
SSBP1-206ENST00000467681 DSG3P32926 999 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 LACTBP83111 547 aaPredicted RBP16.05■□□□□ 0.16
SSBP1-206ENST00000467681 CAP1Q01518 475 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 TRDNQ13061 729 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 ARHGEF6Q15052 776 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 CREB3L3Q68CJ9 461 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 SLFN13Q68D06 897 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 LBX2Q6XYB7 198 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
SSBP1-206ENST00000467681 DGKHQ86XP1 1220 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 LRRC47Q8N1G4 583 aaKnown RBP16.05■□□□□ 0.16
SSBP1-206ENST00000467681 CD99L2Q8TCZ2 262 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 MORF4L1Q9UBU8 362 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
SSBP1-206ENST00000467681 KIF22Q14807 665 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 FAM110CQ1W6H9 321 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 Q3C1V9 767 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 IQCA1Q86XH1 822 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 GPRC5AQ8NFJ5 357 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 TMEM47Q9BQJ4 181 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 TANGO6Q9C0B7 1094 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 EFCC1Q9HA90 598 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
SSBP1-206ENST00000467681 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
SSBP1-206ENST00000467681 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
SSBP1-206ENST00000467681 FLOT1O75955 427 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 MCCP23508 829 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 PSMC4P43686 418 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
SSBP1-206ENST00000467681 NCOA7Q8NI08 942 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 GMCL1Q96IK5 515 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 ZSCAN10Q96SZ4 725 aaPredicted RBP16.03■□□□□ 0.16
SSBP1-206ENST00000467681 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
SSBP1-206ENST00000467681 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 ADAMTS5Q9UNA0 930 aa16.03■□□□□ 0.16
SSBP1-206ENST00000467681 PEX10O60683 326 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 REC8O95072 547 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 GNRH1P01148 92 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 CTGFP29279 349 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 TSGA10IPQ3SY00 556 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 RNF20Q5VTR2 975 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 CYB5R4Q7L1T6 521 aa16.02■□□□□ 0.16
SSBP1-206ENST00000467681 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms