RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 PRPF3O43395 683 aaKnown RBP11.07□□□□□ -0.64
SRPRB-202ENST00000466636 FIBPO43427 364 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
SRPRB-202ENST00000466636 NCLP19338 710 aaKnown RBP11.07□□□□□ -0.64
SRPRB-202ENST00000466636 KIF5BP33176 963 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 KIF23Q02241 960 aaPredicted RBP11.07□□□□□ -0.64
SRPRB-202ENST00000466636 PKN1Q16512 942 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 TATDN1Q6P1N9 297 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
SRPRB-202ENST00000466636 GPT2Q8TD30 523 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 MTMR4Q9NYA4 1195 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 STX8Q9UNK0 236 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
SRPRB-202ENST00000466636 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
SRPRB-202ENST00000466636 KIF28PB7ZC32 967 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 TCP10L2B9ZVM9 353 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 GADD45BO75293 160 aaPredicted RBP11.06□□□□□ -0.64
SRPRB-202ENST00000466636 MBD3O95983 291 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 GMPSP49915 693 aaPredicted RBP11.06□□□□□ -0.64
SRPRB-202ENST00000466636 EIF6P56537 245 aaKnown RBP11.06□□□□□ -0.64
SRPRB-202ENST00000466636 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 SLC35G1Q2M3R5 365 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 ZSCAN29Q8IWY8 852 aaPredicted RBP11.06□□□□□ -0.64
SRPRB-202ENST00000466636 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 MYOZ2Q9NPC6 264 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 MAD2L2Q9UI95 211 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 ELP1O95163 1332 aa11.06□□□□□ -0.64
SRPRB-202ENST00000466636 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
SRPRB-202ENST00000466636 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 WNT10BO00744 389 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 GNAQP50148 359 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 ATL3Q6DD88 541 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 BRAPQ7Z569 592 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 LEO1Q8WVC0 666 aaPredicted RBP11.05□□□□□ -0.64
SRPRB-202ENST00000466636 DPF2Q92785 391 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 TFIP11Q9UBB9 837 aaKnown RBP11.05□□□□□ -0.64
SRPRB-202ENST00000466636 PGAP2Q9UHJ9 254 aa11.05□□□□□ -0.64
SRPRB-202ENST00000466636 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
SRPRB-202ENST00000466636 MYO1BO43795 1136 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 TTLL1O95922 423 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 EGFRP00533 1210 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 MMP1P03956 469 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 SNHG28P0DPA3 235 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■□□□ 13.1
SRPRB-202ENST00000466636 UBE2HP62256 183 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
SRPRB-202ENST00000466636 TRIM29Q14134 588 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
SRPRB-202ENST00000466636 PPP4R3BQ5MIZ7 849 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 ARHGAP27Q6ZUM4 889 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 RASGRP2Q7LDG7 609 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 ZNF396Q96N95 335 aaPredicted RBP11.04□□□□□ -0.64
SRPRB-202ENST00000466636 USP28Q96RU2 1077 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 CSRNP1Q96S65 589 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 LZTS2Q9BRK4 669 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 SYT17Q9BSW7 474 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 TRIM34Q9BYJ4 488 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 SCAND2PQ9GZW5 306 aaPredicted RBP11.04□□□□□ -0.64
SRPRB-202ENST00000466636 VEZTQ9HBM0 779 aa11.04□□□□□ -0.64
SRPRB-202ENST00000466636 SIPA1L1O43166 1804 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 hCG_1642624A0A1W2PR95 340 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 MPHOSPH10O00566 681 aaKnown RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 LMNB1P20700 586 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 JAG1P78504 1218 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 RRP1BQ14684 758 aaKnown RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 PFKFB3Q16875 520 aaPredicted RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 LRRC47Q8N1G4 583 aaKnown RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 SPATA32Q96LK8 384 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 SPZ1Q9BXG8 430 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 GZF1Q9H116 711 aaPredicted RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 HERC5Q9UII4 1024 aaKnown RBP11.03□□□□□ -0.64
SRPRB-202ENST00000466636 RCOR1Q9UKL0 485 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 GJA3Q9Y6H8 435 aa11.03□□□□□ -0.64
SRPRB-202ENST00000466636 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.64
SRPRB-202ENST00000466636 MYH1P12882 1939 aa11.02□□□□□ -0.65
SRPRB-202ENST00000466636 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
SRPRB-202ENST00000466636 KLRF2D3W0D1 207 aa11.02□□□□□ -0.65
SRPRB-202ENST00000466636 CYTH3O43739 400 aa11.02□□□□□ -0.65
SRPRB-202ENST00000466636 TBC1D12O60347 775 aa11.02□□□□□ -0.65
SRPRB-202ENST00000466636 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
SRPRB-202ENST00000466636 PDHBP11177 359 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms