RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 VCPKMTQ9H867 229 aa19.34■□□□□ 0.69
COL1A1-202ENST00000463440 A0A0D9SFI3 127 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 ADCY3O60266 1144 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 MAPK4P31152 587 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 UBXN2AP68543 259 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 CCNA1P78396 465 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 NMIQ13287 307 aaPredicted RBP19.33■□□□□ 0.68
COL1A1-202ENST00000463440 COG2Q14746 738 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 LBX2Q6XYB7 198 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 PXYLP1Q8TE99 480 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 GOPCQ9HD26 462 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 HOXC10Q9NYD6 342 aa19.33■□□□□ 0.68
COL1A1-202ENST00000463440 POTEFA5A3E0 1075 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 SPDYE16A6NNV3 312 aaPredicted RBP19.32■□□□□ 0.68
COL1A1-202ENST00000463440 PEX10O60683 326 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 PRDM1O75626 825 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 MYCP01106 439 aaPredicted RBP19.32■□□□□ 0.68
COL1A1-202ENST00000463440 SDSP20132 328 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 Q3C1V9 767 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 KIAA1755Q5JYT7 1200 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 SPICE1Q8N0Z3 855 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL1A1-202ENST00000463440 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
COL1A1-202ENST00000463440 DOCK3Q8IZD9 2030 aa19.32■□□□□ 0.68
COL1A1-202ENST00000463440 KIAA0100Q14667 2235 aaKnown RBP19.31■□□□□ 0.68
COL1A1-202ENST00000463440 WDR46O15213 610 aaKnown RBP19.31■□□□□ 0.68
COL1A1-202ENST00000463440 FOXP2O15409 715 aa19.31■□□□□ 0.68
COL1A1-202ENST00000463440 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
COL1A1-202ENST00000463440 ALX1Q15699 326 aa19.31■□□□□ 0.68
COL1A1-202ENST00000463440 VPS53Q5VIR6 699 aa19.31■□□□□ 0.68
COL1A1-202ENST00000463440 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
COL1A1-202ENST00000463440 NYAP2Q9P242 653 aa19.31■□□□□ 0.68
COL1A1-202ENST00000463440 RBBP6Q7Z6E9 1792 aaKnown RBP19.31■□□□□ 0.68
COL1A1-202ENST00000463440 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
COL1A1-202ENST00000463440 HIP1O00291 1037 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 RAD21O60216 631 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 CNMDO75829 334 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 TSPY3P0CV98 308 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 TSPY8P0CW00 308 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 NUDT12Q9BQG2 462 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 PORCNQ9H237 461 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 DIAPH3Q9NSV4 1193 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 GJD2Q9UKL4 321 aa19.3■□□□□ 0.68
COL1A1-202ENST00000463440 CCDC171Q6TFL3 1326 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 FLOT1O75955 427 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 ELNP15502 786 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 MTFR1Q15390 333 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 PLEKHH3Q7Z736 793 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 MB21D1Q8N884 522 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 NEDD1Q8NHV4 660 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 SOCS4Q8WXH5 440 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 BTBD7Q9P203 1132 aa19.29■□□□□ 0.68
COL1A1-202ENST00000463440 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 HSPD1P10809 573 aaKnown RBP19.28■□□□□ 0.68
COL1A1-202ENST00000463440 EN2P19622 333 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-202ENST00000463440 PDE4AP27815 886 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 DSG3P32926 999 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 TFAP4Q01664 338 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 CTDSPL2Q05D32 466 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 GPR142Q7Z601 462 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 ZNF589Q86UQ0 364 aaPredicted RBP19.28■□□□□ 0.68
COL1A1-202ENST00000463440 MTMR4Q9NYA4 1195 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 PLIN4Q96Q06 1357 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 CENPFP49454 3210 aa19.28■□□□□ 0.68
COL1A1-202ENST00000463440 ZMYM6O95789 1325 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 TTLL1O95922 423 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 FGAP02671 866 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 INHAP05111 366 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 CCL5P13501 91 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 PPP4R3BQ5MIZ7 849 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 WDR78Q5VTH9 848 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 CEP95Q96GE4 821 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 RNF208Q9H0X6 261 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 SYNPO2Q9UMS6 1093 aa19.27■□□□□ 0.68
COL1A1-202ENST00000463440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
COL1A1-202ENST00000463440 FAM83BQ5T0W9 1011 aa19.26■□□□□ 0.67
COL1A1-202ENST00000463440 TTC22Q5TAA0 569 aa19.26■□□□□ 0.67
COL1A1-202ENST00000463440 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
COL1A1-202ENST00000463440 CWC27Q6UX04 472 aaKnown RBP19.26■□□□□ 0.67
COL1A1-202ENST00000463440 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
COL1A1-202ENST00000463440 MKL1Q969V6 931 aa19.26■□□□□ 0.67
COL1A1-202ENST00000463440 ATG4CQ96DT6 458 aa19.26■□□□□ 0.67
COL1A1-202ENST00000463440 IVNS1ABPQ9Y6Y0 642 aa19.26■□□□□ 0.67
COL1A1-202ENST00000463440 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 F5H6K3 240 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 HMGCRP04035 888 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 XRCC5P13010 732 aaKnown RBP19.25■□□□□ 0.67
COL1A1-202ENST00000463440 CYP2B6P20813 491 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 RGS2P41220 211 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 KLRC3Q07444 240 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 MORN1Q5T089 497 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
COL1A1-202ENST00000463440 SPATC1LQ9H0A9 340 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 RLFQ13129 1914 aa19.25■□□□□ 0.67
COL1A1-202ENST00000463440 MYH4Q9Y623 1939 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 PLXNB2O15031 1838 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 SLC15A5A6NIM6 579 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms