RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 TREML2Q5T2D2 321 aa9.85□□□□□ -0.83
GARNL3-212ENST00000463005 FAM109BQ6ICB4 259 aaPredicted RBP9.85□□□□□ -0.83
GARNL3-212ENST00000463005 DZIP1Q86YF9 867 aaKnown RBP9.85□□□□□ -0.83
GARNL3-212ENST00000463005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.85□□□□□ -0.83
GARNL3-212ENST00000463005 AS3MTQ9HBK9 375 aa9.85□□□□□ -0.83
GARNL3-212ENST00000463005 MORF4L1Q9UBU8 362 aa9.85□□□□□ -0.83
GARNL3-212ENST00000463005 LOC285556D6RIA3 1793 aa9.85□□□□□ -0.83
GARNL3-212ENST00000463005 COL6A3P12111 3177 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 GPR75-ASB3A0A0A6YYF3 556 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 USP17L5A8MUK1 530 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 SYN1P17600 705 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 CAP2P40123 477 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 BTDP43251 543 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 PHKA1P46020 1223 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 SLC4A3P48751 1232 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 MTMR2Q13614 643 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 MAP3K21Q5TCX8 1036 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 CCDC102BQ68D86 513 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 Q7L0L9 218 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 NUDT12Q9BQG2 462 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 ASCC2Q9H1I8 757 aaPredicted RBP9.84□□□□□ -0.83
GARNL3-212ENST00000463005 DDX4Q9NQI0 724 aaKnown RBP9.84□□□□□ -0.83
GARNL3-212ENST00000463005 ABCF2Q9UG63 623 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 RFX7Q2KHR2 1363 aa9.84□□□□□ -0.83
GARNL3-212ENST00000463005 E9PSI1 815 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 HOXA7P31268 230 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-212ENST00000463005 ABL2P42684 1182 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 PICALMQ13492 652 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 SOCS4Q8WXH5 440 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 TRIB2Q92519 343 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
GARNL3-212ENST00000463005 HERC5Q9UII4 1024 aaKnown RBP9.83□□□□□ -0.84
GARNL3-212ENST00000463005 SLC27A5Q9Y2P5 690 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 CUL9Q8IWT3 2517 aa9.83□□□□□ -0.84
GARNL3-212ENST00000463005 MROH7-TTC4A0A0A0MT08 1334 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 GOLGA8CPA6NN73 597 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 C19orf81C9J6K1 198 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 RAD21O60216 631 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 SLURP2P0DP57 97 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 COL6A1P12109 1028 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 CYP2B6P20813 491 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 HMGCS2P54868 508 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 RHBDL3P58872 404 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 GSTO1P78417 241 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 TRIM32Q13049 653 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 MORN1Q5T089 497 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-212ENST00000463005 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.82□□□□□ -0.84
GARNL3-212ENST00000463005 GPRC5AQ8NFJ5 357 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 EPS8L1Q8TE68 723 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 WDR18Q9BV38 432 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 KRTAP3-3Q9BYR6 98 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 KRTAP3-2Q9BYR7 98 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 SIL1Q9H173 461 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 GINM1Q9NU53 330 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 TMOD4Q9NZQ9 345 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 AKAP2Q9Y2D5 859 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 COL2A1P02458 1487 aaPredicted RBP9.82□□□□□ -0.84
GARNL3-212ENST00000463005 PFASO15067 1338 aa9.82□□□□□ -0.84
GARNL3-212ENST00000463005 UBTFL1P0CB47 393 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 MAPK4P31152 587 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 BACE1P56817 501 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 TIMM10P62072 90 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 IRX3P78415 501 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 MECOMQ03112 1051 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 RASGRF1Q13972 1273 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 PDE3AQ14432 1141 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 KMT5BQ4FZB7 885 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 CCAR1Q8IX12 1150 aaKnown RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 CCDC82Q8N4S0 544 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 GTF3C2Q8WUA4 911 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 WNT2BQ93097 391 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 P2RX7Q99572 595 aaKnown RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 DHX36Q9H2U1 1008 aaKnown RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-212ENST00000463005 PI4KBQ9UBF8 816 aa9.81□□□□□ -0.84
GARNL3-212ENST00000463005 ASNSP08243 561 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 ZKSCAN1P17029 563 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-212ENST00000463005 ADORA1P30542 326 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 RGS2P41220 211 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 CACNB2Q08289 660 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-212ENST00000463005 MVPQ14764 893 aaKnown RBP9.8□□□□□ -0.84
GARNL3-212ENST00000463005 ALDH1L2Q3SY69 923 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 BLOC1S3Q6QNY0 202 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 FOXP4Q8IVH2 680 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-212ENST00000463005 ANKK1Q8NFD2 765 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 SSH1Q8WYL5 1049 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 USP6NLQ92738 828 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 LBHD1Q9BQE6 289 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-212ENST00000463005 ZNF521Q96K83 1311 aa9.8□□□□□ -0.84
GARNL3-212ENST00000463005 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 A0A0C4DFX4 3053 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 A0A1B0GUL7 405 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 FAM196BA6NMK8 535 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 ACTN4O43707 911 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms