RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 GPRC5AQ8NFJ5 357 aa15.31■□□□□ 0.04
SHISA5-211ENST00000460758 SHISA4Q96DD7 197 aa15.31■□□□□ 0.04
SHISA5-211ENST00000460758 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
SHISA5-211ENST00000460758 PAGR1Q9BTK6 254 aa15.31■□□□□ 0.04
SHISA5-211ENST00000460758 RPAP3Q9H6T3 665 aaPredicted RBP15.31■□□□□ 0.04
SHISA5-211ENST00000460758 INHAP05111 366 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 GNAT2P19087 354 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 ERVK-24P63145 666 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
SHISA5-211ENST00000460758 Q3C1V9 767 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 GTF3C2Q8WUA4 911 aaPredicted RBP15.3■□□□□ 0.04
SHISA5-211ENST00000460758 PORCNQ9H237 461 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 GJD2Q9UKL4 321 aa15.3■□□□□ 0.04
SHISA5-211ENST00000460758 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 SPDYE16A6NNV3 312 aaPredicted RBP15.29■□□□□ 0.04
SHISA5-211ENST00000460758 MINDY4BA8MYZ0 360 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 FOXP2O15409 715 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 CCL5P13501 91 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 RASA1P20936 1047 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 TDO2P48775 406 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 LBX2Q6XYB7 198 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHISA5-211ENST00000460758 UNC93B1Q9H1C4 597 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 ARHGEF10LQ9HCE6 1279 aa15.29■□□□□ 0.04
SHISA5-211ENST00000460758 BIN2Q9UBW5 565 aaPredicted RBP15.29■□□□□ 0.04
SHISA5-211ENST00000460758 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
SHISA5-211ENST00000460758 ALPK3Q96L96 1907 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 EEF2P13639 858 aaKnown RBP15.28■□□□□ 0.04
SHISA5-211ENST00000460758 UBXN2AP68543 259 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 CCDC129Q6ZRS4 1044 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 IFNL3Q8IZI9 196 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 VCPKMTQ9H867 229 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 RABGAP1Q9Y3P9 1069 aa15.28■□□□□ 0.04
SHISA5-211ENST00000460758 PLXNA1Q9UIW2 1896 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
SHISA5-211ENST00000460758 APPP05067 770 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 MAPK4P31152 587 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 SPICE1Q8N0Z3 855 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 LPAR1Q92633 364 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 TANGO6Q9C0B7 1094 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 RNF208Q9H0X6 261 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
SHISA5-211ENST00000460758 HIP1O00291 1037 aa15.26■□□□□ 0.03
SHISA5-211ENST00000460758 GJB1P08034 283 aa15.26■□□□□ 0.03
SHISA5-211ENST00000460758 GPR142Q7Z601 462 aa15.26■□□□□ 0.03
SHISA5-211ENST00000460758 SOCS4Q8WXH5 440 aa15.26■□□□□ 0.03
SHISA5-211ENST00000460758 TRIB2Q92519 343 aa15.26■□□□□ 0.03
SHISA5-211ENST00000460758 KANSL2Q9H9L4 492 aa15.26■□□□□ 0.03
SHISA5-211ENST00000460758 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 PRDM1O75626 825 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 HMGCRP04035 888 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 CYP2B6P20813 491 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 GJA8P48165 433 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 TRIM32Q13049 653 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 NMIQ13287 307 aaPredicted RBP15.25■□□□□ 0.03
SHISA5-211ENST00000460758 COG2Q14746 738 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 MORN1Q5T089 497 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 USP6NLQ92738 828 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 NACAP1Q9BZK3 213 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 NAPBQ9H115 298 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
SHISA5-211ENST00000460758 PLIN4Q96Q06 1357 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 IGKV6D-41A0A0C4DH26 115 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
SHISA5-211ENST00000460758 CAPN2P17655 700 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 CHMLP26374 656 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 PPARAQ07869 468 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 VPS53Q5VIR6 699 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 PRPF38BQ5VTL8 546 aaKnown RBP15.24■□□□□ 0.03
SHISA5-211ENST00000460758 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 U2AF1L4Q8WU68 220 aaKnown RBP15.24■□□□□ 0.03
SHISA5-211ENST00000460758 FAM227BQ96M60 508 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 NUDT12Q9BQG2 462 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 PAK6Q9NQU5 681 aaPredicted RBP15.24■□□□□ 0.03
SHISA5-211ENST00000460758 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
SHISA5-211ENST00000460758 CDC45O75419 566 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 FLOT1O75955 427 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 DSG3P32926 999 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 CCNA1P78396 465 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 UBE2Q1Q7Z7E8 422 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
SHISA5-211ENST00000460758 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 ATG4CQ96DT6 458 aa15.23■□□□□ 0.03
SHISA5-211ENST00000460758 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.23■□□□□ 0.03
SHISA5-211ENST00000460758 XRCC5P13010 732 aaKnown RBP15.22■□□□□ 0.03
SHISA5-211ENST00000460758 RGS2P41220 211 aa15.22■□□□□ 0.03
SHISA5-211ENST00000460758 CCL14Q16627 93 aa15.22■□□□□ 0.03
SHISA5-211ENST00000460758 WDR78Q5VTH9 848 aa15.22■□□□□ 0.03
SHISA5-211ENST00000460758 CWC27Q6UX04 472 aaKnown RBP15.22■□□□□ 0.03
SHISA5-211ENST00000460758 DEFB118Q96PH6 123 aa15.22■□□□□ 0.03
SHISA5-211ENST00000460758 APBA2Q99767 749 aa15.22■□□□□ 0.03
SHISA5-211ENST00000460758 MOV10L1Q9BXT6 1211 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms