RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 OR8K1Q8NGG5 319 aa13.53□□□□□ -0.24
CPNE6-202ENST00000460657 PCDHB6Q9Y5E3 794 aa13.53□□□□□ -0.24
CPNE6-202ENST00000460657 TRAPPC10P48553 1259 aa13.52□□□□□ -0.24
CPNE6-202ENST00000460657 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.24
CPNE6-202ENST00000460657 SLIT1O75093 1534 aa13.52□□□□□ -0.24
CPNE6-202ENST00000460657 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.24
CPNE6-202ENST00000460657 PTPREP23469 700 aa13.52□□□□□ -0.24
CPNE6-202ENST00000460657 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.24
CPNE6-202ENST00000460657 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.24
CPNE6-202ENST00000460657 GRAMD1CQ8IYS0 662 aa13.52□□□□□ -0.24
CPNE6-202ENST00000460657 H7C1D1 291 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.25
CPNE6-202ENST00000460657 ALX1Q15699 326 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 PTPN21Q16825 1174 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 NBPF11Q86T75 865 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 NEDD4P46934 1319 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 RIMBP3CA6NJZ7 1639 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 OPA1O60313 960 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 CTDNEP1O95476 244 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 CABP7Q86V35 215 aa13.52□□□□□ -0.25
CPNE6-202ENST00000460657 LOC102724428A0A0B4J2F2 783 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 SIK1P57059 783 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 SMC1AQ14683 1233 aaKnown RBP13.51□□□□□ -0.25
CPNE6-202ENST00000460657 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 LONP1P36776 959 aaKnown RBP13.51□□□□□ -0.25
CPNE6-202ENST00000460657 TXKP42681 527 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 STAG1Q8WVM7 1258 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 SAMSN1Q9NSI8 373 aaKnown RBP13.51□□□□□ -0.25
CPNE6-202ENST00000460657 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
CPNE6-202ENST00000460657 CDC27P30260 824 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 BRINP3Q76B58 766 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 ATP8A2Q9NTI2 1148 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
CPNE6-202ENST00000460657 TNIP1Q15025 636 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
CPNE6-202ENST00000460657 RPN1P04843 607 aaKnown RBP13.5□□□□□ -0.25
CPNE6-202ENST00000460657 CASP14P31944 242 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 SEMA3EO15041 775 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
CPNE6-202ENST00000460657 COPB1P53618 953 aaKnown RBP13.5□□□□□ -0.25
CPNE6-202ENST00000460657 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
CPNE6-202ENST00000460657 ZBTB9Q96C00 473 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 MTA3Q9BTC8 594 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 RSPH14Q9UHP6 348 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 GALNT17Q6IS24 598 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
CPNE6-202ENST00000460657 MAATS1Q7Z4T9 603 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 SECISBP2LQ93073 1101 aaKnown RBP13.5□□□□□ -0.25
CPNE6-202ENST00000460657 EHMT1Q9H9B1 1298 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
CPNE6-202ENST00000460657 TRAF5O00463 557 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 ATP8B1O43520 1251 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 DNM2P50570 870 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 ARID5AQ03989 594 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 CETN1Q12798 172 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 CNBD1Q8NA66 436 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
CPNE6-202ENST00000460657 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
CPNE6-202ENST00000460657 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
CPNE6-202ENST00000460657 IFFO1Q0D2I5 559 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 SHC4Q6S5L8 630 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 CCDC65Q8IXS2 484 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 CDC23Q9UJX2 597 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 CPDO75976 1380 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 UBN2Q6ZU65 1347 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 VAV2P52735 878 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 RCAN1P53805 252 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 RBL2Q08999 1139 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 SUSD4Q5VX71 490 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 MICALCLQ6ZW33 695 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 MAPKAPK5Q8IW41 473 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 IQCDQ96DY2 449 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
CPNE6-202ENST00000460657 UFL1O94874 794 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 INF2Q27J81 1249 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 CCDC84Q86UT8 332 aaPredicted RBP13.49□□□□□ -0.25
CPNE6-202ENST00000460657 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 SELENOOQ9BVL4 669 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 HAUS4Q9H6D7 363 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 INCENPQ9NQS7 918 aa13.49□□□□□ -0.25
CPNE6-202ENST00000460657 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 SMYD4Q8IYR2 804 aaPredicted RBP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 REXO1Q8N1G1 1221 aaKnown RBP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 RPGRIP1Q96KN7 1286 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 SAR1BQ9Y6B6 198 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms