RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DEFB129Q9H1M3 183 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 NCOA5Q9HCD5 579 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDX4Q9NQI0 724 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 INCENPQ9NQS7 918 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 MTMR4Q9NYA4 1195 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 NYAP2Q9P242 653 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 FAM198AQ9UFP1 575 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 PNMA2Q9UL42 364 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 BRPF3Q9ULD4 1205 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SYNPO2Q9UMS6 1093 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 NOL7Q9UMY1 257 aaKnown RBP6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 CSADQ9Y600 493 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 SNED1Q8TER0 1413 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 PITPNM2Q9BZ72 1349 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 STK36Q9NRP7 1315 aa6.75□□□□□ -1.33
RNU1-88P-201ENST00000459274 TCHHQ07283 1943 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 ATRNL1Q5VV63 1379 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 DDTLA6NHG4 134 aaPredicted RBP6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 KLRF2D3W0D1 207 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 PRPF3O43395 683 aaKnown RBP6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 FMNL1O95466 1100 aaPredicted RBP6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 F13A1P00488 732 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 GNA11P29992 359 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 EPHX2P34913 555 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 ADD1P35611 737 aaKnown RBP6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 USP14P54578 494 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 NFIAQ12857 509 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 NBR1Q14596 966 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 SEC23AQ15436 765 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 MCTP2Q6DN12 878 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 TATDN1Q6P1N9 297 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 MIGA2Q7L4E1 593 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 ARMC9Q7Z3E5 817 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 BRAPQ7Z569 592 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 JMYQ8N9B5 988 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 DCAF4Q8WV16 495 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 ANKS1AQ92625 1134 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 CEP95Q96GE4 821 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 TMEM47Q9BQJ4 181 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 TMEM39BQ9GZU3 492 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 NBPF3Q9H094 633 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 C6orf50Q9HD87 102 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 SH3GLB2Q9NR46 395 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 GGA3Q9NZ52 723 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 CEP131Q9UPN4 1083 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 TAF6LQ9Y6J9 622 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 V9GY48 417 aaPredicted RBP6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZNF541Q9H0D2 1346 aa6.74□□□□□ -1.33
RNU1-88P-201ENST00000459274 ADAMTSL1Q8N6G6 1762 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 USP17L5A8MUK1 530 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 NMT2O60551 498 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 LARGE1O95461 756 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 GH2P01242 217 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 EEF2P13639 858 aaKnown RBP6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 AKR1B1P15121 316 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 RXRAP19793 462 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 CAP2P40123 477 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 EPS15P42566 896 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 GABPAQ06546 454 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 GRM4Q14833 912 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 SLFN13Q68D06 897 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 GALNT17Q6IS24 598 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 KRT26Q7Z3Y9 468 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 RAB11FIP4Q86YS3 637 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 SLC44A5Q8NCS7 719 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 NSUN7Q8NE18 718 aaKnown RBP6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 TNPO1Q92973 898 aaKnown RBP6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 CUL5Q93034 780 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 VAT1LQ9HCJ6 419 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 TMOD4Q9NZQ9 345 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 ATAD5Q96QE3 1844 aa6.73□□□□□ -1.33
RNU1-88P-201ENST00000459274 PLIN4Q96Q06 1357 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZNF646O15015 1829 aaPredicted RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 CCDC194A0A1B0GVG4 234 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 C19orf81C9J6K1 198 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 POTEB2H3BUK9 544 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 MARCH6O60337 910 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 GDF11O95390 407 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 BMP15O95972 392 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 MBD3O95983 291 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 BMP3P12645 472 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 SCG2P13521 617 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 SHMT1P34896 483 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 KRT2P35908 639 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 MRPL12P52815 198 aaKnown RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 FOSBP53539 338 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 NAPAP54920 295 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 SEPT2Q15019 361 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 ZRSR1Q15695 479 aaKnown RBP6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 HEATR3Q7Z4Q2 680 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 SPNS2Q8IVW8 549 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 SMARCC2Q8TAQ2 1214 aa6.72□□□□□ -1.33
RNU1-88P-201ENST00000459274 RBM46Q8TBY0 533 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms