RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 AMOTL1Q8IY63 956 aa25.99■■□□□ 1.75
CPNE1-220ENST00000458038 SHCBP1Q8NEM2 672 aa25.99■■□□□ 1.75
CPNE1-220ENST00000458038 SDR42E1Q8WUS8 393 aa25.99■■□□□ 1.75
CPNE1-220ENST00000458038 CCDC17Q96LX7 622 aa25.99■■□□□ 1.75
CPNE1-220ENST00000458038 A0A1W2PRG0 241 aa25.98■■□□□ 1.75
CPNE1-220ENST00000458038 SOX1O00570 391 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-220ENST00000458038 MAGEA10P43363 369 aaPredicted RBP25.98■■□□□ 1.75
CPNE1-220ENST00000458038 LRIT3Q3SXY7 679 aa25.98■■□□□ 1.75
CPNE1-220ENST00000458038 LCORLQ8N3X6 602 aa25.98■■□□□ 1.75
CPNE1-220ENST00000458038 ARHGEF10LQ9HCE6 1279 aa25.98■■□□□ 1.75
CPNE1-220ENST00000458038 SLC5A4Q9NY91 659 aa25.98■■□□□ 1.75
CPNE1-220ENST00000458038 FRMPD3Q5JV73 1810 aa25.98■■□□□ 1.75
CPNE1-220ENST00000458038 SYN1P17600 705 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 ADD2P35612 726 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 DPP9Q86TI2 863 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 DDRGK1Q96HY6 314 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 TANGO6Q9C0B7 1094 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 FLRT1Q9NZU1 646 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 DDX20Q9UHI6 824 aaKnown RBP25.97■■□□□ 1.75
CPNE1-220ENST00000458038 COL6A3P12111 3177 aa25.97■■□□□ 1.75
CPNE1-220ENST00000458038 ZNF236Q9UL36 1845 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 OLFML2BQ68BL8 750 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 TDHQ8IZJ6 230 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 LRCH3Q96II8 777 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 MOV10L1Q9BXT6 1211 aaKnown RBP25.96■■□□□ 1.75
CPNE1-220ENST00000458038 SPATC1LQ9H0A9 340 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 ARMT1Q9H993 441 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 COG6Q9Y2V7 657 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 RLFQ13129 1914 aa25.96■■□□□ 1.75
CPNE1-220ENST00000458038 BAZ2AQ9UIF9 1905 aaKnown RBP25.95■■□□□ 1.74
CPNE1-220ENST00000458038 IGHA2P01877 340 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 CNGA1P29973 690 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 LRRC26Q2I0M4 334 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 ABRAQ8N0Z2 381 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 NPLOC4Q8TAT6 608 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 HAUS7Q99871 368 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 UBE2OQ9C0C9 1292 aaKnown RBP25.95■■□□□ 1.74
CPNE1-220ENST00000458038 BOLA2Q9H3K6 86 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 MROH8Q9H579 483 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 TMX2Q9Y320 296 aa25.95■■□□□ 1.74
CPNE1-220ENST00000458038 MYH7P12883 1935 aa25.94■■□□□ 1.74
CPNE1-220ENST00000458038 MBD4O95243 580 aa25.94■■□□□ 1.74
CPNE1-220ENST00000458038 UBE3CQ15386 1083 aa25.94■■□□□ 1.74
CPNE1-220ENST00000458038 ZSCAN25Q6NSZ9 544 aa25.94■■□□□ 1.74
CPNE1-220ENST00000458038 A0A0C4DFX4 3053 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 ADORA2AP29274 412 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 DSG3P32926 999 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 ICA1Q05084 483 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 C12orf60Q5U649 245 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 ARRDC4Q8NCT1 418 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 VCPKMTQ9H867 229 aa25.93■■□□□ 1.74
CPNE1-220ENST00000458038 DNM1LO00429 736 aa25.92■■□□□ 1.74
CPNE1-220ENST00000458038 CYP2D6P10635 497 aa25.92■■□□□ 1.74
CPNE1-220ENST00000458038 CYP2C19P33261 490 aa25.92■■□□□ 1.74
CPNE1-220ENST00000458038 EVX2Q03828 476 aa25.92■■□□□ 1.74
CPNE1-220ENST00000458038 SLC44A5Q8NCS7 719 aa25.92■■□□□ 1.74
CPNE1-220ENST00000458038 DYNLL2Q96FJ2 89 aa25.92■■□□□ 1.74
CPNE1-220ENST00000458038 SENP6Q9GZR1 1112 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-220ENST00000458038 A0A0G2JMZ2 1700 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 ZNFX1Q9P2E3 1918 aaKnown RBP25.91■■□□□ 1.74
CPNE1-220ENST00000458038 WDR46O15213 610 aaKnown RBP25.91■■□□□ 1.74
CPNE1-220ENST00000458038 FLOT1O75955 427 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 CYBAP13498 195 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 ERCC3P19447 782 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 CDK8P49336 464 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 C16orf86Q6ZW13 317 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 SIAH1Q8IUQ4 282 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 BCL11AQ9H165 835 aa25.91■■□□□ 1.74
CPNE1-220ENST00000458038 USP17L12C9JPN9 530 aa25.9■■□□□ 1.74
CPNE1-220ENST00000458038 USP17L21D6R901 530 aa25.9■■□□□ 1.74
CPNE1-220ENST00000458038 PRKAB2O43741 272 aa25.9■■□□□ 1.74
CPNE1-220ENST00000458038 AKR1B1P15121 316 aa25.9■■□□□ 1.74
CPNE1-220ENST00000458038 LRRCC1Q9C099 1032 aa25.9■■□□□ 1.74
CPNE1-220ENST00000458038 KANSL2Q9H9L4 492 aa25.9■■□□□ 1.74
CPNE1-220ENST00000458038 SLC25A27O95847 323 aa25.89■■□□□ 1.74
CPNE1-220ENST00000458038 PLS1Q14651 629 aa25.89■■□□□ 1.74
CPNE1-220ENST00000458038 KIAA1755Q5JYT7 1200 aa25.89■■□□□ 1.74
CPNE1-220ENST00000458038 SLC17A8Q8NDX2 589 aa25.88■■□□□ 1.73
CPNE1-220ENST00000458038 TRPV1Q8NER1 839 aa25.88■■□□□ 1.73
CPNE1-220ENST00000458038 LBHD1Q9BQE6 289 aaPredicted RBP25.88■■□□□ 1.73
CPNE1-220ENST00000458038 RCAN3Q9UKA8 241 aa25.88■■□□□ 1.73
CPNE1-220ENST00000458038 SLC4A4Q9Y6R1 1079 aa25.88■■□□□ 1.73
CPNE1-220ENST00000458038 SEPT4O43236 478 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 FCER1AP12319 257 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 NCAPG2Q86XI2 1143 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 SPICE1Q8N0Z3 855 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 DEFB123Q8N688 67 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 ATG4CQ96DT6 458 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 GOPCQ9HD26 462 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 ADAMTS5Q9UNA0 930 aa25.87■■□□□ 1.73
CPNE1-220ENST00000458038 LAMA2P24043 3122 aaKnown RBP25.87■■□□□ 1.73
CPNE1-220ENST00000458038 PARP14Q460N5 1801 aa25.86■■□□□ 1.73
CPNE1-220ENST00000458038 KBTBD13C9JR72 458 aa25.86■■□□□ 1.73
CPNE1-220ENST00000458038 COBLO75128 1261 aa25.86■■□□□ 1.73
CPNE1-220ENST00000458038 PRKAG2Q9UGJ0 569 aa25.86■■□□□ 1.73
CPNE1-220ENST00000458038 NRBP1Q9UHY1 535 aa25.86■■□□□ 1.73
CPNE1-220ENST00000458038 EEF2P13639 858 aaKnown RBP25.85■■□□□ 1.73
CPNE1-220ENST00000458038 COPB2P35606 906 aa25.85■■□□□ 1.73
CPNE1-220ENST00000458038 SLFNL1Q499Z3 407 aa25.85■■□□□ 1.73
CPNE1-220ENST00000458038 CTR9Q6PD62 1173 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms