RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 CNOT7Q9UIV1 285 aaKnown RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 PPP2R3BQ9Y5P8 575 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 GJA3Q9Y6H8 435 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 MYH8P13535 1937 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 PITPNM2Q9BZ72 1349 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 GREB1LQ9C091 1923 aaPredicted RBP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 DDTLA6NHG4 134 aaPredicted RBP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 SMIM22K7EJ46 135 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 CTDNEP1O95476 244 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 TTLL1O95922 423 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 YBX3P16989 372 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 CACNB3P54284 484 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 TCP10Q12799 353 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 TMEM179Q6ZVK1 233 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 PNMA1Q8ND90 353 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 NKX2-3Q8TAU0 364 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 RNF26Q9BY78 433 aaPredicted RBP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZSCAN16Q9H4T2 348 aaPredicted RBP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 IL17RBQ9NRM6 502 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 MTMR4Q9NYA4 1195 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 RNF181Q9P0P0 153 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 ORC3Q9UBD5 711 aaPredicted RBP10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 PCDHAC2Q9Y5I4 1007 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 CNTNAP1P78357 1384 aa10.37□□□□□ -0.75
CDC42EP3-204ENST00000457889 SIPA1L1O43166 1804 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 CLRN2A0PK11 232 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 TCP10L2B9ZVM9 353 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 H3BQV1 296 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 JAK2O60674 1132 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 DEXIO95424 95 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 F13A1P00488 732 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 MAP3K10Q02779 954 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 SSRP1Q08945 709 aaKnown RBP10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 GRM4Q14833 912 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 NTRK3Q16288 839 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 SLC4A8Q2Y0W8 1093 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 CERKLQ49MI3 558 aaPredicted RBP10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 IFFO2Q5TF58 517 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 TMTC3Q6ZXV5 915 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 SH3BP5LQ7L8J4 393 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 NUP133Q8WUM0 1156 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 VEZTQ9HBM0 779 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 NYAP2Q9P242 653 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 STX8Q9UNK0 236 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 MTMR6Q9Y217 621 aa10.36□□□□□ -0.75
CDC42EP3-204ENST00000457889 NMT2O60551 498 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 XBP1P17861 261 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 CDC27P30260 824 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 TRIM29Q14134 588 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 CSPP1Q1MSJ5 1256 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZFPM1Q8IX07 1006 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 CEP95Q96GE4 821 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 C8orf76Q96K31 380 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 TMEM47Q9BQJ4 181 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 DNAJC18Q9H819 358 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 CABP5Q9NP86 173 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 ADARB2Q9NS39 739 aaKnown RBP10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZDHHC9Q9Y397 364 aa10.35□□□□□ -0.75
CDC42EP3-204ENST00000457889 VPS37CA5D8V6 355 aaPredicted RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 SOCS7O14512 581 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 PRPF3O43395 683 aaKnown RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 BAG4O95429 457 aaKnown RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 FDPSP14324 419 aaKnown RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 AKR1B1P15121 316 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 MCM4P33991 863 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 PKP1Q13835 747 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 GPR162Q16538 588 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 ABCB5Q2M3G0 1257 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 ASPRV1Q53RT3 343 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 GPATCH4Q5T3I0 446 aaKnown RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 DCAF15Q66K64 600 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 MKL1Q969V6 931 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 MYL10Q9BUA6 226 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 SPZ1Q9BXG8 430 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 SH2D4AQ9H788 454 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 PGAP2Q9UHJ9 254 aa10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 GOLGB1Q14789 3259 aaKnown RBP10.34□□□□□ -0.75
CDC42EP3-204ENST00000457889 hCG_1984214I3L0E3 225 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 MPHOSPH10O00566 681 aaKnown RBP10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 PARP1P09874 1014 aaKnown RBP10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 RXRAP19793 462 aa10.33□□□□□ -0.76
CDC42EP3-204ENST00000457889 ICA1Q05084 483 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms