RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 CCDC77Q9BR77 488 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 ELP1O95163 1332 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 BMP15O95972 392 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 GRAPQ13588 217 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 PLS1Q14651 629 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 ZNF174Q15697 407 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 ME3Q16798 604 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 COL23A1Q86Y22 540 aaPredicted RBP10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 LRRC8AQ8IWT6 810 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 GRAPLQ8TC17 118 aaPredicted RBP10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 CACTINQ8WUQ7 758 aaKnown RBP10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 CAPN7Q9Y6W3 813 aa10.9□□□□□ -0.66
MSC-AS1-201ENST00000457356 ADGRB1O14514 1584 aa10.9□□□□□ -0.67
MSC-AS1-201ENST00000457356 TMEM110-MUSTN1A8MSY1 372 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 TSPY3P0CV98 308 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 TSPY8P0CW00 308 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 TMTC2Q8N394 836 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 TACO1Q9BSH4 297 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 GPBP1L1Q9HC44 474 aaPredicted RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 IMPACTQ9P2X3 320 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 CSADQ9Y600 493 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 CD163L1Q9NR16 1453 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 CLGNO14967 610 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 GJC1P36383 396 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 RAD51AP2Q09MP3 1159 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 GPR161Q8N6U8 529 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 KIAA1524Q8TCG1 905 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 ESR2Q92731 530 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 ZNF277Q9NRM2 450 aaPredicted RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 KDRP35968 1356 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 SEC62Q99442 399 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 PPANQ9NQ55 473 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 SAP30BPQ9UHR5 308 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 LEMD3Q9Y2U8 911 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 SEC31AO94979 1220 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 STAMBPO95630 424 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 ATP1A2P50993 1020 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 BEND3Q5T5X7 828 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 IQCGQ9H095 443 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 USP44Q9H0E7 712 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 STIM2Q9P246 746 aa10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
MSC-AS1-201ENST00000457356 NEBLO76041 1014 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 TNNC1P63316 161 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 LACTBP83111 547 aaPredicted RBP10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 PTPN21Q16825 1174 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 TNNI3KQ59H18 835 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 CPSF2Q9P2I0 782 aaKnown RBP10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 MTMR6Q9Y217 621 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 FPGT-TNNI3KV9GXZ4 949 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 RAD50Q92878 1312 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 PLSCR1O15162 318 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 SLFN14P0C7P3 912 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 ACTN2P35609 894 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 KLHL7Q8IXQ5 586 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 PLVAPQ9BX97 442 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 KRT23Q9C075 422 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 PDE11AQ9HCR9 933 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 TAB2Q9NYJ8 693 aa10.88□□□□□ -0.67
MSC-AS1-201ENST00000457356 FAM170AA1A519 330 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 TCP10L2B9ZVM9 353 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 PEX19P40855 299 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 USP28Q96RU2 1077 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 DDX41Q9UJV9 622 aaKnown RBP10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 CLRN2A0PK11 232 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 E7EVH7 732 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 BUB1BO60566 1050 aaPredicted RBP10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 BCAMP50895 628 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 MYCBPQ99417 103 aaPredicted RBP10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 AATFQ9NY61 560 aaKnown RBP eCLIP10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 DPEP1P16444 411 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 MAGEA1P43355 309 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 SETDB1Q15047 1291 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 LRRC24Q50LG9 513 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 SYNE4Q8N205 404 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 NOC4LQ9BVI4 516 aaKnown RBP10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 KIAA1468Q9P260 1216 aa10.87□□□□□ -0.67
MSC-AS1-201ENST00000457356 RNF113AO15541 343 aaKnown RBP10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 DESP17661 470 aa10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 NLRP12P59046 1061 aa10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 ZYXQ15942 572 aaKnown RBP10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 PHKBQ93100 1093 aa10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 TTC14Q96N46 770 aa10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 GPR101Q96P66 508 aaPredicted RBP10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 SMC6Q96SB8 1091 aa10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 ZCCHC17Q9NP64 241 aaKnown RBP10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
MSC-AS1-201ENST00000457356 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms