RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 C7orf61Q8IZ16 206 aa15.57■□□□□ 0.08
TREX1-203ENST00000456089 GTF3C2Q8WUA4 911 aaPredicted RBP15.57■□□□□ 0.08
TREX1-203ENST00000456089 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.57■□□□□ 0.08
TREX1-203ENST00000456089 FLRT1Q9NZU1 646 aa15.57■□□□□ 0.08
TREX1-203ENST00000456089 XRCC5P13010 732 aaKnown RBP15.56■□□□□ 0.08
TREX1-203ENST00000456089 SPICE1Q8N0Z3 855 aa15.56■□□□□ 0.08
TREX1-203ENST00000456089 APBA2Q99767 749 aa15.56■□□□□ 0.08
TREX1-203ENST00000456089 TANGO6Q9C0B7 1094 aa15.56■□□□□ 0.08
TREX1-203ENST00000456089 PUS7LQ9H0K6 701 aaKnown RBP15.56■□□□□ 0.08
TREX1-203ENST00000456089 ECHDC1Q9NTX5 307 aa15.56■□□□□ 0.08
TREX1-203ENST00000456089 ZMYND8Q9ULU4 1186 aaPredicted RBP15.56■□□□□ 0.08
TREX1-203ENST00000456089 MYH4Q9Y623 1939 aa15.56■□□□□ 0.08
TREX1-203ENST00000456089 PLXNA1Q9UIW2 1896 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 USP17L12C9JPN9 530 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 USP17L21D6R901 530 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 MAP2K5Q13163 448 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 SIAH1Q8IUQ4 282 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 STK11IPQ8N1F8 1099 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 PRO3102Q9H379 93 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 STAP2Q9UGK3 403 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 OGDHLQ9ULD0 1010 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 SLC4A4Q9Y6R1 1079 aa15.55■□□□□ 0.08
TREX1-203ENST00000456089 GREB1LQ9C091 1923 aaPredicted RBP15.55■□□□□ 0.08
TREX1-203ENST00000456089 SYN1P17600 705 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 PTPREP23469 700 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 CDK8P49336 464 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 CCNA1P78396 465 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 C12orf60Q5U649 245 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 ZSCAN25Q6NSZ9 544 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 TMEM179Q6ZVK1 233 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 ANKLE1Q8NAG6 615 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 NPLOC4Q8TAT6 608 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 NBPF3Q9H094 633 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 C11orf49Q9H6J7 331 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 ATP8A2Q9NTI2 1148 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 SWAP70Q9UH65 585 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 ZNF236Q9UL36 1845 aa15.54■□□□□ 0.08
TREX1-203ENST00000456089 PFASO15067 1338 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 ATP2B2Q01814 1243 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 ICA1Q05084 483 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 UBE3CQ15386 1083 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 LHX8Q68G74 356 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 CTR9Q6PD62 1173 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 LBX2Q6XYB7 198 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 MOV10L1Q9BXT6 1211 aaKnown RBP15.53■□□□□ 0.08
TREX1-203ENST00000456089 SUPT16HQ9Y5B9 1047 aaKnown RBP15.53■□□□□ 0.08
TREX1-203ENST00000456089 DNAH12Q6ZR08 3092 aa15.53■□□□□ 0.08
TREX1-203ENST00000456089 SMCHD1A6NHR9 2005 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 SLC15A5A6NIM6 579 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 ERC2O15083 957 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 CYP2C19P33261 490 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 GRB14Q14449 540 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 PLS1Q14651 629 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 COG2Q14746 738 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 ANKRD45Q5TZF3 282 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 C16orf86Q6ZW13 317 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 TRMT44Q8IYL2 757 aaKnown RBP15.52■□□□□ 0.08
TREX1-203ENST00000456089 ATG4CQ96DT6 458 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 RWDD1Q9H446 243 aaPredicted RBP15.52■□□□□ 0.08
TREX1-203ENST00000456089 IVNS1ABPQ9Y6Y0 642 aa15.52■□□□□ 0.08
TREX1-203ENST00000456089 SOX1O00570 391 aaPredicted RBP15.51■□□□□ 0.07
TREX1-203ENST00000456089 RAD21O60216 631 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 FLOT1O75955 427 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 GLRX3O76003 335 aaKnown RBP15.51■□□□□ 0.07
TREX1-203ENST00000456089 EEF2P13639 858 aaKnown RBP15.51■□□□□ 0.07
TREX1-203ENST00000456089 CNGA1P29973 690 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 TRPV1Q8NER1 839 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 SPATC1LQ9H0A9 340 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 VCPKMTQ9H867 229 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 ARHGEF10LQ9HCE6 1279 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 FBXO28Q9NVF7 368 aa15.51■□□□□ 0.07
TREX1-203ENST00000456089 CAPN2P17655 700 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 ERCC3P19447 782 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 ADORA2AP29274 412 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 DSG3P32926 999 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
TREX1-203ENST00000456089 LRRFIP1Q32MZ4 808 aaKnown RBP15.5■□□□□ 0.07
TREX1-203ENST00000456089 MFSD14CQ5VZR4 134 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 OSBP2Q969R2 916 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 STRBPQ96SI9 672 aaKnown RBP15.5■□□□□ 0.07
TREX1-203ENST00000456089 HOXC10Q9NYD6 342 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 TMX2Q9Y320 296 aa15.5■□□□□ 0.07
TREX1-203ENST00000456089 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 COBLO75128 1261 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 LRRC26Q2I0M4 334 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 ANO1Q5XXA6 986 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 DPP9Q86TI2 863 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 NCAPG2Q86XI2 1143 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 KBTBD3Q8NAB2 608 aa15.49■□□□□ 0.07
TREX1-203ENST00000456089 OTUD7AQ8TE49 926 aaPredicted RBP15.49■□□□□ 0.07
TREX1-203ENST00000456089 GSG1L2A8MUP6 293 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 MINDY4BA8MYZ0 360 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 M0R2C6 588 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 HOXC6P09630 235 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 COL6A1P12109 1028 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 EXOC6Q8TAG9 804 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 LPAR1Q92633 364 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 LRCH3Q96II8 777 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms