RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 PRPF40AO75400 957 aaKnown RBP18.71■□□□□ 0.59
TMEM220-202ENST00000455996 FOSBP53539 338 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 KRT85P78386 507 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 AKAP17AQ02040 695 aaKnown RBP18.71■□□□□ 0.59
TMEM220-202ENST00000455996 RRP1BQ14684 758 aaKnown RBP18.71■□□□□ 0.59
TMEM220-202ENST00000455996 ABCB5Q2M3G0 1257 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 TBC1D10BQ4KMP7 808 aaPredicted RBP18.71■□□□□ 0.59
TMEM220-202ENST00000455996 BRAPQ7Z569 592 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 STAG2Q8N3U4 1231 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 TEPSINQ96N21 525 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 SPZ1Q9BXG8 430 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.59
TMEM220-202ENST00000455996 GJB4Q9NTQ9 266 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 SYNPO2Q9UMS6 1093 aa18.71■□□□□ 0.59
TMEM220-202ENST00000455996 V9GY48 417 aaPredicted RBP18.71■□□□□ 0.59
TMEM220-202ENST00000455996 MPHOSPH10O00566 681 aaKnown RBP18.7■□□□□ 0.58
TMEM220-202ENST00000455996 PARP1P09874 1014 aaKnown RBP18.7■□□□□ 0.58
TMEM220-202ENST00000455996 PDHBP11177 359 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 TRIM29Q14134 588 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 RASA3Q14644 834 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 CSPP1Q1MSJ5 1256 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 SLC35G1Q2M3R5 365 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
TMEM220-202ENST00000455996 RBM26Q5T8P6 1007 aaKnown RBP18.7■□□□□ 0.58
TMEM220-202ENST00000455996 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
TMEM220-202ENST00000455996 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 CCDC82Q8N4S0 544 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 RNF181Q9P0P0 153 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
TMEM220-202ENST00000455996 ELP1O95163 1332 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 MMP1P03956 469 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 U2AF2P26368 475 aaKnown RBP eCLIP18.69■□□□□ 0.58
TMEM220-202ENST00000455996 PFKFB3Q16875 520 aaPredicted RBP18.69■□□□□ 0.58
TMEM220-202ENST00000455996 ASPRV1Q53RT3 343 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 CLEC10AQ8IUN9 316 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 SIAH1Q8IUQ4 282 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 CDAN1Q8IWY9 1227 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 FAM177A1Q8N128 213 aaPredicted RBP18.69■□□□□ 0.58
TMEM220-202ENST00000455996 HACL1Q9UJ83 578 aa18.69■□□□□ 0.58
TMEM220-202ENST00000455996 JAG1P78504 1218 aa18.68■□□□□ 0.58
TMEM220-202ENST00000455996 SEPT2Q15019 361 aa18.68■□□□□ 0.58
TMEM220-202ENST00000455996 KLHL40Q2TBA0 621 aa18.68■□□□□ 0.58
TMEM220-202ENST00000455996 C9orf131Q5VYM1 1079 aa18.68■□□□□ 0.58
TMEM220-202ENST00000455996 SCAND2PQ9GZW5 306 aaPredicted RBP18.68■□□□□ 0.58
TMEM220-202ENST00000455996 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
TMEM220-202ENST00000455996 USP17L5A8MUK1 530 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 KIF28PB7ZC32 967 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 KLRF2D3W0D1 207 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 CYTH3O43739 400 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 SCG2P13521 617 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 EEF2P13639 858 aaKnown RBP18.67■□□□□ 0.58
TMEM220-202ENST00000455996 XBP1P17861 261 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 ICA1Q05084 483 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 SHROOM1Q2M3G4 852 aaPredicted RBP18.67■□□□□ 0.58
TMEM220-202ENST00000455996 APOBEC3FQ8IUX4 373 aaKnown RBP18.67■□□□□ 0.58
TMEM220-202ENST00000455996 LRRC47Q8N1G4 583 aaKnown RBP18.67■□□□□ 0.58
TMEM220-202ENST00000455996 TRPM4Q8TD43 1214 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 SHISA4Q96DD7 197 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 CABP5Q9NP86 173 aa18.67■□□□□ 0.58
TMEM220-202ENST00000455996 ZC3H4Q9UPT8 1303 aaKnown RBP18.67■□□□□ 0.58
TMEM220-202ENST00000455996 GDF11O95390 407 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 GH2P01242 217 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 ZNF543Q08ER8 600 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 USP17L2Q6R6M4 530 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
TMEM220-202ENST00000455996 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
TMEM220-202ENST00000455996 RIOX1Q9H6W3 641 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 GDPD2Q9HCC8 539 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 SH3GLB2Q9NR46 395 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 CFAP45Q9UL16 551 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 PHF20L1A8MW92 1017 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 MBD3O95983 291 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
TMEM220-202ENST00000455996 EPS15P42566 896 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 SAFBQ15424 915 aaKnown RBP eCLIP18.66■□□□□ 0.58
TMEM220-202ENST00000455996 GPATCH4Q5T3I0 446 aaKnown RBP18.66■□□□□ 0.58
TMEM220-202ENST00000455996 RASGRP2Q7LDG7 609 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 GMCL1P1Q8NEA9 526 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 DCAF4Q8WV16 495 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 DEFB129Q9H1M3 183 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 GINM1Q9NU53 330 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 RCOR1Q9UKL0 485 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 ZBTB21Q9ULJ3 1066 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 PPP2R3BQ9Y5P8 575 aa18.66■□□□□ 0.58
TMEM220-202ENST00000455996 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
TMEM220-202ENST00000455996 FIBPO43427 364 aa18.65■□□□□ 0.58
TMEM220-202ENST00000455996 DDNO94850 711 aaPredicted RBP18.65■□□□□ 0.58
TMEM220-202ENST00000455996 CAP2P40123 477 aa18.65■□□□□ 0.58
TMEM220-202ENST00000455996 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
TMEM220-202ENST00000455996 UBE2HP62256 183 aa18.65■□□□□ 0.58
TMEM220-202ENST00000455996 MYSM1Q5VVJ2 828 aa18.65■□□□□ 0.58
TMEM220-202ENST00000455996 GPT2Q8TD30 523 aa18.65■□□□□ 0.58
TMEM220-202ENST00000455996 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
TMEM220-202ENST00000455996 DDX49Q9Y6V7 483 aaKnown RBP18.65■□□□□ 0.58
TMEM220-202ENST00000455996 TCHHQ07283 1943 aa18.64■□□□□ 0.57
TMEM220-202ENST00000455996 hCG_1642624A0A1W2PR95 340 aa18.64■□□□□ 0.57
TMEM220-202ENST00000455996 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
TMEM220-202ENST00000455996 GOLGA8HP0CJ92 632 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms