RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 SUCOQ9UBS9 1254 aaKnown RBP7.47□□□□□ -1.21
CDH19-202ENST00000454642 A0A0A0MRY4 1105 aa7.46□□□□□ -1.22
CDH19-202ENST00000454642 AGRPO00253 132 aa7.46□□□□□ -1.22
CDH19-202ENST00000454642 DGKGP49619 791 aa7.46□□□□□ -1.22
CDH19-202ENST00000454642 PMS1P54277 932 aaKnown RBP7.46□□□□□ -1.22
CDH19-202ENST00000454642 YOD1Q5VVQ6 348 aaPredicted RBP7.46□□□□□ -1.22
CDH19-202ENST00000454642 LYPD4Q6UWN0 246 aa7.46□□□□□ -1.22
CDH19-202ENST00000454642 KIAA1211Q6ZU35 1233 aa7.46□□□□□ -1.22
CDH19-202ENST00000454642 FGD4Q96M96 766 aa7.46□□□□□ -1.22
CDH19-202ENST00000454642 GAPVD1Q14C86 1478 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 FGD5Q6ZNL6 1462 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 IRS4O14654 1257 aaPredicted RBP7.45□□□□□ -1.22
CDH19-202ENST00000454642 CLEC3AO75596 197 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 CELA2BP08218 269 aaPredicted RBP7.45□□□□□ -1.22
CDH19-202ENST00000454642 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDH19-202ENST00000454642 AXDND1Q5T1B0 1012 aaPredicted RBP7.45□□□□□ -1.22
CDH19-202ENST00000454642 DCAF15Q66K64 600 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 HEATR6Q6AI08 1181 aaKnown RBP7.45□□□□□ -1.22
CDH19-202ENST00000454642 FBXO11Q86XK2 927 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 FMR1NBQ8N0W7 255 aaPredicted RBP7.45□□□□□ -1.22
CDH19-202ENST00000454642 ISL2Q96A47 359 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 SLC26A8Q96RN1 970 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 CDC6Q99741 560 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 HAUS7Q99871 368 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 ATXN3LQ9H3M9 355 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 CYP4F12Q9HCS2 524 aa7.45□□□□□ -1.22
CDH19-202ENST00000454642 A0A1W2PQU0 124 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 CNGA1P29973 690 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 CCNFP41002 786 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 FAM209AQ5JX71 171 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 ADAT2Q7Z6V5 191 aaKnown RBP7.44□□□□□ -1.22
CDH19-202ENST00000454642 DTWD1Q8N5C7 304 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 LRRN4CLQ8ND94 238 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 RNF208Q9H0X6 261 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 APEX2Q9UBZ4 518 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 SYNGAP1Q96PV0 1343 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 ANKRD34BA5PLL1 514 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 RAPGEF3O95398 923 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 ASPAP45381 313 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 RAC1P63000 192 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 SOX4Q06945 474 aaPredicted RBP7.44□□□□□ -1.22
CDH19-202ENST00000454642 CCDC144CPQ8IYA2 1237 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 AGGF1Q8N302 714 aaeCLIP7.44□□□□□ -1.22
CDH19-202ENST00000454642 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 EXOC2Q96KP1 924 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 APBA2Q99767 749 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 MKRN2Q9H000 416 aaKnown RBP7.44□□□□□ -1.22
CDH19-202ENST00000454642 ARHGEF4Q9NR80 690 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 FAM105AQ9NUU6 356 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 SUSD2Q9UGT4 822 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 RAD54L2Q9Y4B4 1467 aa7.44□□□□□ -1.22
CDH19-202ENST00000454642 MYCLP1P12525 358 aaPredicted RBP7.43□□□□□ -1.22
CDH19-202ENST00000454642 HOXB4P17483 251 aaPredicted RBP7.43□□□□□ -1.22
CDH19-202ENST00000454642 NIM1KQ8IY84 436 aa7.43□□□□□ -1.22
CDH19-202ENST00000454642 DCAF11Q8TEB1 546 aa7.43□□□□□ -1.22
CDH19-202ENST00000454642 CYB5D2Q8WUJ1 264 aa7.43□□□□□ -1.22
CDH19-202ENST00000454642 TRIM11Q96F44 468 aa7.43□□□□□ -1.22
CDH19-202ENST00000454642 PLAAQ9Y263 795 aa7.43□□□□□ -1.22
CDH19-202ENST00000454642 ACTL7BQ9Y614 415 aa7.43□□□□□ -1.22
CDH19-202ENST00000454642 MEGF11A6BM72 1044 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 CBFA2T2O43439 604 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 ITGAVP06756 1048 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 PPP2R2AP63151 447 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 PABPC4Q13310 644 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDH19-202ENST00000454642 LONRF2Q1L5Z9 754 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDH19-202ENST00000454642 NEDD1Q8NHV4 660 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 SGSM3Q96HU1 749 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDH19-202ENST00000454642 LGR6Q9HBX8 967 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 SUGT1Q9Y2Z0 365 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 ABCA10Q8WWZ4 1543 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 TDRD9Q8NDG6 1382 aaKnown RBP7.42□□□□□ -1.22
CDH19-202ENST00000454642 SHROOM2Q13796 1616 aa7.42□□□□□ -1.22
CDH19-202ENST00000454642 CUX1P39880 1505 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 SPDYE3A6NKU9 549 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 TBX1O43435 398 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 GRIA2P42262 883 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 UBR7Q8N806 425 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 KCT2Q8NC54 265 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 SMG8Q8ND04 991 aaKnown RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 ADCY4Q8NFM4 1077 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 STAG1Q8WVM7 1258 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 NINJ1Q92982 152 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 PLVAPQ9BX97 442 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 FAM126AQ9BYI3 521 aaPredicted RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 DDX56Q9NY93 547 aaKnown RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 CST3P01034 146 aaPredicted RBP7.41□□□□□ -1.22
CDH19-202ENST00000454642 NAT2P11245 290 aa7.41□□□□□ -1.22
CDH19-202ENST00000454642 EVA1CP58658 441 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms