RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 ZDHHC13Q8IUH4 622 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 SMYD4Q8IYR2 804 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 PPP1R13LQ8WUF5 828 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 APPBP2Q92624 585 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 UTP4Q969X6 686 aaKnown RBP5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 MYRFLQ96LU7 910 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 SLC6A18Q96N87 628 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 KIF2CQ99661 725 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 CEP41Q9BYV8 373 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 ACSS3Q9H6R3 686 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 PCMTD2Q9NV79 361 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 FANCLQ9NW38 375 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 KDM2BQ8NHM5 1336 aa5.47□□□□□ -1.53
HMGB1P15-201ENST00000453854 ESYT3A0FGR9 886 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 ADCY3O60266 1144 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 ADAMTS4O75173 837 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 CDC45O75419 566 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 LRIG2O94898 1065 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 PREPP48147 710 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 SSRP1Q08945 709 aaKnown RBP5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 NFIAQ12857 509 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 GNPTABQ3T906 1256 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 PRAMEF13Q5VWM6 474 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 PHACTR4Q8IZ21 702 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 SMARCC1Q92922 1105 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 VWCEQ96DN2 955 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 SGSM3Q96HU1 749 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 FOXQ1Q9C009 403 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 PIDD1Q9HB75 910 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 SUSD2Q9UGT4 822 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 PCOLCE2Q9UKZ9 415 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 LEMD3Q9Y2U8 911 aa5.46□□□□□ -1.54
HMGB1P15-201ENST00000453854 PRR19A6NJB7 356 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 RNGTTO60942 597 aaKnown RBP5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 UVSSAQ2YD98 709 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 C16orf86Q6ZW13 317 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 ARMCX6Q7L4S7 300 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 FAM20CQ8IXL6 584 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 SYNPOQ8N3V7 929 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 MFSD2AQ8NA29 543 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 BAHD1Q8TBE0 780 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 EZH1Q92800 747 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 DPH2Q9BQC3 489 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 SPATA9Q9BWV2 254 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 BRINP2Q9C0B6 783 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 TMX1Q9H3N1 280 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 PFDN2Q9UHV9 154 aa5.45□□□□□ -1.54
HMGB1P15-201ENST00000453854 ANKRD34BA5PLL1 514 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 FAM86C2PA6NEL3 165 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 KIAA1324LA8MWY0 1029 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 C9IYK1 514 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 CBFA2T2O43439 604 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 CLEC3AO75596 197 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 CAPNS1P04632 268 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 BMP3P12645 472 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 GBP1P32455 592 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 ZC3H12BQ5HYM0 836 aaKnown RBP5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 RNF43Q68DV7 783 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 KRTAP1-3Q8IUG1 177 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 ANKRD13AQ8IZ07 590 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 ZNF513Q8N8E2 541 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 ZBTB38Q8NAP3 1195 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 DNAJB8Q8NHS0 232 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 CEP131Q9UPN4 1083 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 PTCH2Q9Y6C5 1203 aa5.44□□□□□ -1.54
HMGB1P15-201ENST00000453854 IQCA1LA6NCM1 817 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 GSC2O15499 205 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 FAM153BP0C7A2 387 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 TMEM67Q5HYA8 995 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 AXDND1Q5T1B0 1012 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 CDPF1Q6NVV7 123 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 SEZ6L2Q6UXD5 910 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 BEND4Q6ZU67 534 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 LRRC47Q8N1G4 583 aaKnown RBP5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 ZSWIM2Q8NEG5 633 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 GPATCH3Q96I76 525 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 FEZ1Q99689 392 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 HAUS7Q99871 368 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 FAM83CQ9BQN1 747 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 KLHL25Q9H0H3 589 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 SEMA6CQ9H3T2 930 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 PRKAB1Q9Y478 270 aa5.43□□□□□ -1.54
HMGB1P15-201ENST00000453854 A0A1W2PQU0 124 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 PPM1GO15355 546 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 COBLO75128 1261 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 EPHX1P07099 455 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 NAT2P11245 290 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 MCTP1Q6DN14 999 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 CLEC10AQ8IUN9 316 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 SHISA5Q8N114 240 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 SHKBP1Q8TBC3 707 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 FBXL18Q96ME1 805 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 SLC26A8Q96RN1 970 aa5.42□□□□□ -1.54
HMGB1P15-201ENST00000453854 APBA2Q99767 749 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms