RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 FLRT1Q9NZU1 646 aa11.73□□□□□ -0.53
SPTLC3-204ENST00000450297 BTBD7Q9P203 1132 aa11.73□□□□□ -0.53
SPTLC3-204ENST00000450297 CCER2I3L3R5 266 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 PLCD1P51178 756 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 PLS1Q14651 629 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 SEPT2Q15019 361 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 LPAR1Q92633 364 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
SPTLC3-204ENST00000450297 SZT2Q5T011 3432 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 KBTBD13C9JR72 458 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 APBB1O00213 710 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 GRB14Q14449 540 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 COG2Q14746 738 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 ANO1Q5XXA6 986 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 CRNKL1Q9BZJ0 848 aaKnown RBP11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.53
SPTLC3-204ENST00000450297 DNM1LO00429 736 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 ADORA2AP29274 412 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 SHMT1P34896 483 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 RTP1P59025 263 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 TTF1Q15361 905 aaPredicted RBP11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 MOV10L1Q9BXT6 1211 aaKnown RBP11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 IL1RAPL2Q9NP60 686 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 DOCK3Q8IZD9 2030 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 ATAD5Q96QE3 1844 aa11.7□□□□□ -0.54
SPTLC3-204ENST00000450297 STRNO43815 780 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 RAD21O60216 631 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 HOXC6P09630 235 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 ERCC3P19447 782 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 TMED8Q6PL24 325 aaPredicted RBP11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 TRPV1Q8NER1 839 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 FERMT2Q96AC1 680 aa11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
SPTLC3-204ENST00000450297 GOLIM4O00461 696 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 FLOT1O75955 427 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 CYP2D6P10635 497 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 PDE6AP16499 860 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 HSP90AB4PQ58FF6 505 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 PRAMEF19Q5SWL8 479 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 CEP85Q6P2H3 762 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 LBX2Q6XYB7 198 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 SPATC1LQ9H0A9 340 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 ARHGEF10LQ9HCE6 1279 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
SPTLC3-204ENST00000450297 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 MAST2Q6P0Q8 1798 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 ALPK3Q96L96 1907 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 A0A1W2PRG0 241 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 RLBP1P12271 317 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 CYBAP13498 195 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 TRIM60Q495X7 471 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 OLFML2BQ68BL8 750 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 TMEM179Q6ZVK1 233 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 CLASRPQ8N2M8 674 aaKnown RBP11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 MB21D1Q8N884 522 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 SLC44A5Q8NCS7 719 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 SDR42E1Q8WUS8 393 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 MROH8Q9H579 483 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 SIPA1L1O43166 1804 aa11.67□□□□□ -0.54
SPTLC3-204ENST00000450297 POTEB2H3BUK9 544 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 SEPT4O43236 478 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 COBLO75128 1261 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 FCER1AP12319 257 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 TIE1P35590 1138 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 ICA1Q05084 483 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 SHHQ15465 462 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 FAM109BQ6ICB4 259 aaPredicted RBP11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 BADQ92934 168 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 ATG4CQ96DT6 458 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 DYNLL2Q96FJ2 89 aa11.66□□□□□ -0.54
SPTLC3-204ENST00000450297 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms