RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 RTN1Q16799 776 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
TRAK1-206ENST00000449246 NAPBQ9H115 298 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 GPR108Q9NPR9 543 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 LUC7L2Q9Y383 392 aaKnown RBP13.3□□□□□ -0.28
TRAK1-206ENST00000449246 ACTN4O43707 911 aaKnown RBP13.3□□□□□ -0.28
TRAK1-206ENST00000449246 MMP1P03956 469 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 IDEP14735 1019 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 SARSP49591 514 aaKnown RBP13.3□□□□□ -0.28
TRAK1-206ENST00000449246 ZNF174Q15697 407 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 WDR93Q6P2C0 686 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 ANKRD18AQ8IVF6 992 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 CCDC51Q96ER9 411 aa13.3□□□□□ -0.28
TRAK1-206ENST00000449246 PIH1D3Q9NQM4 214 aaKnown RBP13.3□□□□□ -0.28
TRAK1-206ENST00000449246 FAM237AA0A1B0GTK4 181 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
TRAK1-206ENST00000449246 KCTD16Q68DU8 428 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 FBXL16Q8N461 479 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
TRAK1-206ENST00000449246 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 MYBL2P10244 700 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 ARHGAP25P42331 645 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 DNA2P51530 1060 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 OTUD6BQ8N6M0 293 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 PAGE5Q96GU1 130 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 ZSWIM5Q9P217 1185 aa13.29□□□□□ -0.28
TRAK1-206ENST00000449246 SRPRBQ9Y5M8 271 aaKnown RBP13.29□□□□□ -0.28
TRAK1-206ENST00000449246 HNRNPH1P31943 449 aaKnown RBP13.28□□□□□ -0.28
TRAK1-206ENST00000449246 COPB1P53618 953 aaKnown RBP13.28□□□□□ -0.28
TRAK1-206ENST00000449246 SLC7A5Q01650 507 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 CKAP4Q07065 602 aaKnown RBP13.28□□□□□ -0.28
TRAK1-206ENST00000449246 TMEM87BQ96K49 555 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
TRAK1-206ENST00000449246 GREM2Q9H772 168 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 TTF1Q15361 905 aaPredicted RBP13.28□□□□□ -0.28
TRAK1-206ENST00000449246 KAT2BQ92831 832 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 ZNHIT6Q9NWK9 470 aaKnown RBP13.28□□□□□ -0.28
TRAK1-206ENST00000449246 VPS54Q9P1Q0 977 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 KCNJ18B7U540 433 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 KRT86O43790 486 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 KCNJ12Q14500 433 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 NTRK3Q16288 839 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 VIPAS39Q9H9C1 493 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
TRAK1-206ENST00000449246 PRPF6O94906 941 aaKnown RBP13.27□□□□□ -0.28
TRAK1-206ENST00000449246 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.28
TRAK1-206ENST00000449246 RDXP35241 583 aaKnown RBP13.27□□□□□ -0.28
TRAK1-206ENST00000449246 PHKA1P46020 1223 aa13.27□□□□□ -0.28
TRAK1-206ENST00000449246 TDO2P48775 406 aa13.27□□□□□ -0.28
TRAK1-206ENST00000449246 WTAPQ15007 396 aa13.27□□□□□ -0.28
TRAK1-206ENST00000449246 CCDC181Q5TID7 509 aa13.27□□□□□ -0.28
TRAK1-206ENST00000449246 APTXQ7Z2E3 356 aaKnown RBP13.27□□□□□ -0.28
TRAK1-206ENST00000449246 LY9Q9HBG7 655 aa13.27□□□□□ -0.28
TRAK1-206ENST00000449246 CPDO75976 1380 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.29
TRAK1-206ENST00000449246 A0A087X0B3 334 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 TTC26A0AVF1 554 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 PRDM1O75626 825 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 NAP1L1P55209 391 aaKnown RBP13.27□□□□□ -0.29
TRAK1-206ENST00000449246 PPARAQ07869 468 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 PDCLQ13371 301 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 NT5DC1Q5TFE4 455 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 MFSD6Q6ZSS7 791 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 NELFBQ8WX92 580 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 HAUS4Q9H6D7 363 aa13.27□□□□□ -0.29
TRAK1-206ENST00000449246 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 ITGA6P23229 1130 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 PPFIA1Q13136 1202 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 HLFQ16534 295 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 CXorf56Q9H5V9 222 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 SMIM22K7EJ46 135 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 PRKAB2O43741 272 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 CIAO1O76071 339 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 XBP1P17861 261 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 ATF3P18847 181 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 CXCR5P32302 372 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 AMPD2Q01433 879 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 PAK1Q13153 545 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 CCDC96Q2M329 555 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■□□□□ 11.2
TRAK1-206ENST00000449246 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 CUL4BQ13620 913 aa13.26□□□□□ -0.29
TRAK1-206ENST00000449246 CCNI2Q6ZMN8 369 aaPredicted RBP13.26□□□□□ -0.29
TRAK1-206ENST00000449246 TRAPPC11Q7Z392 1133 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms