RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 ERVK-9P63128 1117 aa28.63■■■□□ 2.17
MRPL28-205ENST00000447696 ERVK-24P63145 666 aa28.63■■■□□ 2.17
MRPL28-205ENST00000447696 CLEC10AQ8IUN9 316 aa28.63■■■□□ 2.17
MRPL28-205ENST00000447696 HTATIP2Q9BUP3 242 aa28.63■■■□□ 2.17
MRPL28-205ENST00000447696 NAPBQ9H115 298 aa28.63■■■□□ 2.17
MRPL28-205ENST00000447696 MKNK2Q9HBH9 465 aa28.63■■■□□ 2.17
MRPL28-205ENST00000447696 ADCY3O60266 1144 aa28.62■■■□□ 2.17
MRPL28-205ENST00000447696 MAPK4P31152 587 aa28.62■■■□□ 2.17
MRPL28-205ENST00000447696 POTEEQ6S8J3 1075 aa28.62■■■□□ 2.17
MRPL28-205ENST00000447696 CHRDL2Q6WN34 429 aa28.62■■■□□ 2.17
MRPL28-205ENST00000447696 DPF3Q92784 378 aa28.62■■■□□ 2.17
MRPL28-205ENST00000447696 VCPKMTQ9H867 229 aa28.62■■■□□ 2.17
MRPL28-205ENST00000447696 GREB1LQ9C091 1923 aaPredicted RBP28.61■■■□□ 2.17
MRPL28-205ENST00000447696 UBXN2AP68543 259 aa28.61■■■□□ 2.17
MRPL28-205ENST00000447696 PAGR1Q9BTK6 254 aa28.61■■■□□ 2.17
MRPL28-205ENST00000447696 EEF2P13639 858 aaKnown RBP28.6■■■□□ 2.17
MRPL28-205ENST00000447696 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.6■■■□□ 2.17
MRPL28-205ENST00000447696 GJD2Q9UKL4 321 aa28.6■■■□□ 2.17
MRPL28-205ENST00000447696 SPDYE16A6NNV3 312 aaPredicted RBP28.59■■■□□ 2.17
MRPL28-205ENST00000447696 TRIM6-TRIM34B2RNG4 842 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 FOXP2O15409 715 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 SLC3A2P08195 630 aaKnown RBP28.59■■■□□ 2.17
MRPL28-205ENST00000447696 CCNA1P78396 465 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 COG2Q14746 738 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 CCDC129Q6ZRS4 1044 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 TANGO6Q9C0B7 1094 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 HOXC10Q9NYD6 342 aa28.59■■■□□ 2.17
MRPL28-205ENST00000447696 BIN2Q9UBW5 565 aaPredicted RBP28.59■■■□□ 2.17
MRPL28-205ENST00000447696 WDR46O15213 610 aaKnown RBP28.58■■■□□ 2.17
MRPL28-205ENST00000447696 PEX10O60683 326 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 CNMDO75829 334 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 CAPN2P17655 700 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 PDE4BQ07343 736 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 PPARAQ07869 468 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 Q3C1V9 767 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 KIAA1755Q5JYT7 1200 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 SOCS4Q8WXH5 440 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 NR2E3Q9Y5X4 410 aa28.58■■■□□ 2.17
MRPL28-205ENST00000447696 GJB1P08034 283 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 GJA8P48165 433 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 IRX6P78412 446 aaPredicted RBP28.57■■■□□ 2.16
MRPL28-205ENST00000447696 MCMDC2Q4G0Z9 681 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 CCAR1Q8IX12 1150 aaKnown RBP28.57■■■□□ 2.16
MRPL28-205ENST00000447696 ZNF444Q8N0Y2 327 aaPredicted RBP28.57■■■□□ 2.16
MRPL28-205ENST00000447696 STK11IPQ8N1F8 1099 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 SHISA4Q96DD7 197 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 GOPCQ9HD26 462 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 NYAP2Q9P242 653 aa28.57■■■□□ 2.16
MRPL28-205ENST00000447696 A0A0D9SFI3 127 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 ELNP15502 786 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 ATP2B2Q01814 1243 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 MTFR1Q15390 333 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 ALX1Q15699 326 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 DOCK3Q8IZD9 2030 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 RILPL2Q969X0 211 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 FAM227BQ96M60 508 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 PLIN4Q96Q06 1357 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 PORCNQ9H237 461 aa28.56■■■□□ 2.16
MRPL28-205ENST00000447696 RBM27Q9P2N5 1060 aaKnown RBP28.56■■■□□ 2.16
MRPL28-205ENST00000447696 IGKV6D-41A0A0C4DH26 115 aa28.55■■■□□ 2.16
MRPL28-205ENST00000447696 CCL5P13501 91 aa28.55■■■□□ 2.16
MRPL28-205ENST00000447696 SPICE1Q8N0Z3 855 aa28.55■■■□□ 2.16
MRPL28-205ENST00000447696 MB21D1Q8N884 522 aa28.55■■■□□ 2.16
MRPL28-205ENST00000447696 NUDT12Q9BQG2 462 aa28.55■■■□□ 2.16
MRPL28-205ENST00000447696 PRDM1O75626 825 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 INHAP05111 366 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 NMIQ13287 307 aaPredicted RBP28.54■■■□□ 2.16
MRPL28-205ENST00000447696 VPS53Q5VIR6 699 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 GPR142Q7Z601 462 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 PLEKHH3Q7Z736 793 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 BTBD7Q9P203 1132 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 SYNPO2Q9UMS6 1093 aa28.54■■■□□ 2.16
MRPL28-205ENST00000447696 A0A0G2JMZ2 1700 aa28.53■■■□□ 2.16
MRPL28-205ENST00000447696 XRCC5P13010 732 aaKnown RBP28.53■■■□□ 2.16
MRPL28-205ENST00000447696 DSG3P32926 999 aa28.53■■■□□ 2.16
MRPL28-205ENST00000447696 UBE2Q1Q7Z7E8 422 aa28.53■■■□□ 2.16
MRPL28-205ENST00000447696 ANAPC4Q9UJX5 808 aa28.53■■■□□ 2.16
MRPL28-205ENST00000447696 PLXNB2O15031 1838 aa28.53■■■□□ 2.16
MRPL28-205ENST00000447696 ZMYM6O95789 1325 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 RLFQ13129 1914 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 A0A1W2PPC1 479 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 FLOT1O75955 427 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 SDSP20132 328 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 NEDD1Q8NHV4 660 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 RNF208Q9H0X6 261 aa28.52■■■□□ 2.16
MRPL28-205ENST00000447696 CCDC171Q6TFL3 1326 aa28.51■■■□□ 2.15
MRPL28-205ENST00000447696 HMGCRP04035 888 aa28.51■■■□□ 2.15
MRPL28-205ENST00000447696 MFAP1P55081 439 aaKnown RBP28.51■■■□□ 2.15
MRPL28-205ENST00000447696 MORN1Q5T089 497 aa28.51■■■□□ 2.15
MRPL28-205ENST00000447696 TRMT44Q8IYL2 757 aaKnown RBP28.51■■■□□ 2.15
MRPL28-205ENST00000447696 USP6NLQ92738 828 aa28.51■■■□□ 2.15
MRPL28-205ENST00000447696 CWC22Q9HCG8 908 aaKnown RBP28.51■■■□□ 2.15
MRPL28-205ENST00000447696 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.51■■■□□ 2.15
MRPL28-205ENST00000447696 SZT2Q5T011 3432 aa28.51■■■□□ 2.15
MRPL28-205ENST00000447696 RANBP2P49792 3224 aaKnown RBP28.5■■■□□ 2.15
MRPL28-205ENST00000447696 HIP1O00291 1037 aa28.5■■■□□ 2.15
MRPL28-205ENST00000447696 TSPY3P0CV98 308 aa28.5■■■□□ 2.15
MRPL28-205ENST00000447696 TSPY8P0CW00 308 aa28.5■■■□□ 2.15
MRPL28-205ENST00000447696 MKL1Q969V6 931 aa28.5■■■□□ 2.15
MRPL28-205ENST00000447696 UNC93B1Q9H1C4 597 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms