RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 ZNF831Q5JPB2 1677 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 PDS5AQ29RF7 1337 aaKnown RBP19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 RAD21O60216 631 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 SBK1Q52WX2 424 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 PTPREP23469 700 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 MTA3Q9BTC8 594 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 XPO4Q9C0E2 1151 aaKnown RBP19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 KCNQ5Q9NR82 932 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 LY75O60449 1722 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 UQCRHLA0A096LP55 91 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 BBOX1O75936 387 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 CAVIN2O95810 425 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 UQCRHP07919 91 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 KIAA1524Q8TCG1 905 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 C16orf45Q96MC5 204 aaPredicted RBP19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 ZC3H12CQ9C0D7 883 aaKnown RBP19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 DBNDD1Q9H9R9 158 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 MYH6P13533 1939 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 EYA3Q99504 573 aa19.24■□□□□ 0.67
LAPTM4B-201ENST00000445593 NID2Q14112 1375 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 FLT1P17948 1338 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 COBLO75128 1261 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 CACNB3P54284 484 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 ATP2B2Q01814 1243 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 TYW1BQ6NUM6 668 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 USP17L2Q6R6M4 530 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 A0A087X0B3 334 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 RASA1P20936 1047 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 CDK8P49336 464 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 PTGDRQ13258 359 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 TTC38Q5R3I4 469 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 KLHL10Q6JEL2 608 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 TMC6Q7Z403 805 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 TMEM47Q9BQJ4 181 aa19.23■□□□□ 0.67
LAPTM4B-201ENST00000445593 NPY5RQ15761 445 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 SYMPKQ92797 1274 aaKnown RBP19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 TTF2Q9UNY4 1162 aaKnown RBP19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 PCP11498 1178 aaKnown RBP19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 KIF5BP33176 963 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 RCAN1P53805 252 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 PDCL3Q9H2J4 239 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 POSTNQ15063 836 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 UBA5Q9GZZ9 404 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 PCDHAC2Q9Y5I4 1007 aa19.22■□□□□ 0.67
LAPTM4B-201ENST00000445593 FAM205AQ6ZU69 1335 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 BMP6P22004 513 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 SLC35G1Q2M3R5 365 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 DPP8Q6V1X1 898 aaPredicted RBP19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 TRMT1Q9NXH9 659 aaKnown RBP19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 DAGLAQ9Y4D2 1042 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 FRMPD2Q68DX3 1309 aaPredicted RBP19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 GOLGA8FQ08AF8 430 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 GOLGA8DPQ0D2H9 430 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 SMYD4Q8IYR2 804 aaPredicted RBP19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 CERS5Q8N5B7 392 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 PLIN2Q99541 437 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 CEP131Q9UPN4 1083 aa19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 SRPRBQ9Y5M8 271 aaKnown RBP19.21■□□□□ 0.67
LAPTM4B-201ENST00000445593 CCDC88AQ3V6T2 1871 aa19.21■□□□□ 0.66
LAPTM4B-201ENST00000445593 SERPINC1P01008 464 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 IL1R1P14778 569 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 FAM196BA6NMK8 535 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 CYTH3O43739 400 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 CEP95Q96GE4 821 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 RHBDL3P58872 404 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 NCAPHQ15003 741 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 PFKFB3Q16875 520 aaPredicted RBP19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 ZNF592Q92610 1267 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 DPF2Q92785 391 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 FANCLQ9NW38 375 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 MAD2L2Q9UI95 211 aa19.2■□□□□ 0.66
LAPTM4B-201ENST00000445593 UBR3Q6ZT12 1888 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 STX17P56962 302 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 RBM6P78332 1123 aaKnown RBP19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 BLZF1Q9H2G9 400 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 GPR75-ASB3A0A0A6YYF3 556 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 PPP4CP60510 307 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 TCP10Q12799 353 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 MAN1B1Q9UKM7 699 aa19.19■□□□□ 0.66
LAPTM4B-201ENST00000445593 KLRF2D3W0D1 207 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 SRGNP10124 158 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 RBM5P52756 815 aaKnown RBP eCLIP19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 TPM4P67936 248 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 CFAP100Q494V2 611 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 KIAA0825Q8IV33 1275 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 SMARCE1Q969G3 411 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 TIGD1Q96MW7 591 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 DDX4Q9NQI0 724 aaKnown RBP19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 WWC2Q6AWC2 1192 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 SARM1Q6SZW1 724 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 DGKHQ86XP1 1220 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 RASSF8Q8NHQ8 419 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 MRFAP1L1Q96HT8 127 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 TUBE1Q9UJT0 475 aa19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 MPHOSPH10O00566 681 aaKnown RBP19.18■□□□□ 0.66
LAPTM4B-201ENST00000445593 CHRNA5P30532 468 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms