RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SIAH1Q8IUQ4 282 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 LPAR1Q92633 364 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 VCPKMTQ9H867 229 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 TMX2Q9Y320 296 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 SPDYE16A6NNV3 312 aaPredicted RBP25.1■■□□□ 1.61
CDKN3-204ENST00000442975 SLC3A2P08195 630 aaKnown RBP25.1■■□□□ 1.61
CDKN3-204ENST00000442975 EN2P19622 333 aaPredicted RBP25.1■■□□□ 1.61
CDKN3-204ENST00000442975 IRF5Q13568 498 aa25.1■■□□□ 1.61
CDKN3-204ENST00000442975 POTEEQ6S8J3 1075 aa25.1■■□□□ 1.61
CDKN3-204ENST00000442975 SAMD1Q6SPF0 538 aaPredicted RBP25.1■■□□□ 1.61
CDKN3-204ENST00000442975 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.1■■□□□ 1.61
CDKN3-204ENST00000442975 PORCNQ9H237 461 aa25.1■■□□□ 1.61
CDKN3-204ENST00000442975 HELLSQ9NRZ9 838 aa25.1■■□□□ 1.61
CDKN3-204ENST00000442975 INHAP05111 366 aa25.09■■□□□ 1.61
CDKN3-204ENST00000442975 MAPK4P31152 587 aa25.09■■□□□ 1.61
CDKN3-204ENST00000442975 PPARAQ07869 468 aa25.09■■□□□ 1.61
CDKN3-204ENST00000442975 NMIQ13287 307 aaPredicted RBP25.09■■□□□ 1.61
CDKN3-204ENST00000442975 VPS53Q5VIR6 699 aa25.09■■□□□ 1.61
CDKN3-204ENST00000442975 WDR78Q5VTH9 848 aa25.09■■□□□ 1.61
CDKN3-204ENST00000442975 RABGAP1Q9Y3P9 1069 aa25.09■■□□□ 1.61
CDKN3-204ENST00000442975 FOXP2O15409 715 aa25.08■■□□□ 1.61
CDKN3-204ENST00000442975 CNMDO75829 334 aa25.08■■□□□ 1.61
CDKN3-204ENST00000442975 FLOT1O75955 427 aa25.08■■□□□ 1.61
CDKN3-204ENST00000442975 CCNA1P78396 465 aa25.08■■□□□ 1.61
CDKN3-204ENST00000442975 Q3C1V9 767 aa25.08■■□□□ 1.61
CDKN3-204ENST00000442975 ZNF444Q8N0Y2 327 aaPredicted RBP25.08■■□□□ 1.61
CDKN3-204ENST00000442975 GOPCQ9HD26 462 aa25.08■■□□□ 1.61
CDKN3-204ENST00000442975 CCL5P13501 91 aa25.07■■□□□ 1.6
CDKN3-204ENST00000442975 PDE4BQ07343 736 aa25.07■■□□□ 1.6
CDKN3-204ENST00000442975 MCMDC2Q4G0Z9 681 aa25.07■■□□□ 1.6
CDKN3-204ENST00000442975 PXYLP1Q8TE99 480 aa25.07■■□□□ 1.6
CDKN3-204ENST00000442975 SOCS4Q8WXH5 440 aa25.07■■□□□ 1.6
CDKN3-204ENST00000442975 OSBPL3Q9H4L5 887 aa25.07■■□□□ 1.6
CDKN3-204ENST00000442975 WDR46O15213 610 aaKnown RBP25.06■■□□□ 1.6
CDKN3-204ENST00000442975 COG2Q14746 738 aa25.06■■□□□ 1.6
CDKN3-204ENST00000442975 GPR142Q7Z601 462 aa25.06■■□□□ 1.6
CDKN3-204ENST00000442975 RNF208Q9H0X6 261 aa25.06■■□□□ 1.6
CDKN3-204ENST00000442975 BTBD7Q9P203 1132 aa25.06■■□□□ 1.6
CDKN3-204ENST00000442975 CYP2B6P20813 491 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 LBX2Q6XYB7 198 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 PLEKHH3Q7Z736 793 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 ZNF589Q86UQ0 364 aaPredicted RBP25.05■■□□□ 1.6
CDKN3-204ENST00000442975 NUDT12Q9BQG2 462 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 UNC93B1Q9H1C4 597 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 GJD2Q9UKL4 321 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 MYH8P13535 1937 aa25.05■■□□□ 1.6
CDKN3-204ENST00000442975 MGAMO43451 1857 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 TSPY3P0CV98 308 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 TSPY8P0CW00 308 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 SDSP20132 328 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 CTDSPL2Q05D32 466 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 FAM47AQ5JRC9 791 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 ATG4CQ96DT6 458 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 DIAPH3Q9NSV4 1193 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 HOXC10Q9NYD6 342 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 CCDC171Q6TFL3 1326 aa25.04■■□□□ 1.6
CDKN3-204ENST00000442975 FAM83BQ5T0W9 1011 aa25.03■■□□□ 1.6
CDKN3-204ENST00000442975 TICAM2Q86XR7 235 aa25.03■■□□□ 1.6
CDKN3-204ENST00000442975 CEP95Q96GE4 821 aa25.03■■□□□ 1.6
CDKN3-204ENST00000442975 CLIP2Q9UDT6 1046 aa25.03■■□□□ 1.6
CDKN3-204ENST00000442975 HMGCRP04035 888 aa25.02■■□□□ 1.6
CDKN3-204ENST00000442975 PDE4AP27815 886 aa25.02■■□□□ 1.6
CDKN3-204ENST00000442975 PLS1Q14651 629 aa25.02■■□□□ 1.6
CDKN3-204ENST00000442975 LRRC47Q8N1G4 583 aaKnown RBP25.02■■□□□ 1.6
CDKN3-204ENST00000442975 NUP88Q99567 741 aaPredicted RBP25.02■■□□□ 1.6
CDKN3-204ENST00000442975 FBXO28Q9NVF7 368 aa25.02■■□□□ 1.6
CDKN3-204ENST00000442975 NYAP2Q9P242 653 aa25.02■■□□□ 1.6
CDKN3-204ENST00000442975 KIAA0100Q14667 2235 aaKnown RBP25.02■■□□□ 1.6
CDKN3-204ENST00000442975 IGKV6D-41A0A0C4DH26 115 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 DSG3P32926 999 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 RGS2P41220 211 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 TFAP4Q01664 338 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 MB21D1Q8N884 522 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 IVNS1ABPQ9Y6Y0 642 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 PLIN4Q96Q06 1357 aa25.01■■□□□ 1.59
CDKN3-204ENST00000442975 TNRC18O15417 2968 aaPredicted RBP25.01■■□□□ 1.59
CDKN3-204ENST00000442975 RBBP6Q7Z6E9 1792 aaKnown RBP25■■□□□ 1.59
CDKN3-204ENST00000442975 NDUFB10O96000 172 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 GJB1P08034 283 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 HSPD1P10809 573 aaKnown RBP25■■□□□ 1.59
CDKN3-204ENST00000442975 ZKSCAN1P17029 563 aaPredicted RBP25■■□□□ 1.59
CDKN3-204ENST00000442975 CWC27Q6UX04 472 aaKnown RBP25■■□□□ 1.59
CDKN3-204ENST00000442975 NEDD1Q8NHV4 660 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 TRIB2Q92519 343 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 SHISA4Q96DD7 197 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 APBA2Q99767 749 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 SPATC1LQ9H0A9 340 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 TOMM22Q9NS69 142 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 MTMR4Q9NYA4 1195 aa25■■□□□ 1.59
CDKN3-204ENST00000442975 MKI67P46013 3256 aaKnown RBP25■■□□□ 1.59
CDKN3-204ENST00000442975 TSPY2A6NKD2 308 aa24.99■■□□□ 1.59
CDKN3-204ENST00000442975 TTLL1O95922 423 aa24.99■■□□□ 1.59
CDKN3-204ENST00000442975 MFAP1P55081 439 aaKnown RBP24.99■■□□□ 1.59
CDKN3-204ENST00000442975 TRIM32Q13049 653 aa24.99■■□□□ 1.59
CDKN3-204ENST00000442975 MORN1Q5T089 497 aa24.99■■□□□ 1.59
CDKN3-204ENST00000442975 NKX2-3Q8TAU0 364 aa24.99■■□□□ 1.59
CDKN3-204ENST00000442975 MOV10L1Q9BXT6 1211 aaKnown RBP24.99■■□□□ 1.59
CDKN3-204ENST00000442975 INCENPQ9NQS7 918 aa24.99■■□□□ 1.59
CDKN3-204ENST00000442975 ISY1Q9ULR0 285 aaKnown RBP24.99■■□□□ 1.59
CDKN3-204ENST00000442975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms