RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 CNMDO75829 334 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 EEF2P13639 858 aaKnown RBP26.41■■□□□ 1.82
HDLBP-220ENST00000442730 FAM227BQ96M60 508 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 VCPKMTQ9H867 229 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 MKNK2Q9HBH9 465 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 HELLSQ9NRZ9 838 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 RABGAP1Q9Y3P9 1069 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 A0A0G2JMZ2 1700 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 TRIM6-TRIM34B2RNG4 842 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 ELNP15502 786 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 MTFR1Q15390 333 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 Q3C1V9 767 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 SPICE1Q8N0Z3 855 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 PXYLP1Q8TE99 480 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 TANGO6Q9C0B7 1094 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 GJD2Q9UKL4 321 aa26.4■■□□□ 1.82
HDLBP-220ENST00000442730 PRDM1O75626 825 aa26.39■■□□□ 1.82
HDLBP-220ENST00000442730 EN2P19622 333 aaPredicted RBP26.39■■□□□ 1.82
HDLBP-220ENST00000442730 ATP2B2Q01814 1243 aa26.39■■□□□ 1.82
HDLBP-220ENST00000442730 PPARAQ07869 468 aa26.39■■□□□ 1.82
HDLBP-220ENST00000442730 VPS53Q5VIR6 699 aa26.39■■□□□ 1.82
HDLBP-220ENST00000442730 PORCNQ9H237 461 aa26.39■■□□□ 1.82
HDLBP-220ENST00000442730 ZNF287Q9HBT7 754 aa26.39■■□□□ 1.82
HDLBP-220ENST00000442730 PLXNB2O15031 1838 aa26.39■■□□□ 1.81
HDLBP-220ENST00000442730 MAPK4P31152 587 aa26.38■■□□□ 1.81
HDLBP-220ENST00000442730 BIN2Q9UBW5 565 aaPredicted RBP26.38■■□□□ 1.81
HDLBP-220ENST00000442730 MKI67P46013 3256 aaKnown RBP26.38■■□□□ 1.81
HDLBP-220ENST00000442730 DOCK3Q8IZD9 2030 aa26.38■■□□□ 1.81
HDLBP-220ENST00000442730 RLFQ13129 1914 aa26.37■■□□□ 1.81
HDLBP-220ENST00000442730 IGKV6D-41A0A0C4DH26 115 aa26.37■■□□□ 1.81
HDLBP-220ENST00000442730 NMIQ13287 307 aaPredicted RBP26.37■■□□□ 1.81
HDLBP-220ENST00000442730 RILPL2Q969X0 211 aa26.37■■□□□ 1.81
HDLBP-220ENST00000442730 BTBD7Q9P203 1132 aa26.37■■□□□ 1.81
HDLBP-220ENST00000442730 PLIN4Q96Q06 1357 aa26.36■■□□□ 1.81
HDLBP-220ENST00000442730 WDR46O15213 610 aaKnown RBP26.36■■□□□ 1.81
HDLBP-220ENST00000442730 INHAP05111 366 aa26.36■■□□□ 1.81
HDLBP-220ENST00000442730 CCL5P13501 91 aa26.36■■□□□ 1.81
HDLBP-220ENST00000442730 UBXN2AP68543 259 aa26.36■■□□□ 1.81
HDLBP-220ENST00000442730 COG2Q14746 738 aa26.36■■□□□ 1.81
HDLBP-220ENST00000442730 MCMDC2Q4G0Z9 681 aa26.36■■□□□ 1.81
HDLBP-220ENST00000442730 SLC3A2P08195 630 aaKnown RBP26.35■■□□□ 1.81
HDLBP-220ENST00000442730 CCNA1P78396 465 aa26.35■■□□□ 1.81
HDLBP-220ENST00000442730 PDE4BQ07343 736 aa26.35■■□□□ 1.81
HDLBP-220ENST00000442730 GPR142Q7Z601 462 aa26.35■■□□□ 1.81
HDLBP-220ENST00000442730 ZNF589Q86UQ0 364 aaPredicted RBP26.35■■□□□ 1.81
HDLBP-220ENST00000442730 SOCS4Q8WXH5 440 aa26.35■■□□□ 1.81
HDLBP-220ENST00000442730 GOPCQ9HD26 462 aa26.35■■□□□ 1.81
HDLBP-220ENST00000442730 FLOT1O75955 427 aa26.34■■□□□ 1.81
HDLBP-220ENST00000442730 PDE4AP27815 886 aa26.34■■□□□ 1.81
HDLBP-220ENST00000442730 ZNF444Q8N0Y2 327 aaPredicted RBP26.34■■□□□ 1.81
HDLBP-220ENST00000442730 HOXC10Q9NYD6 342 aa26.34■■□□□ 1.81
HDLBP-220ENST00000442730 NYAP2Q9P242 653 aa26.34■■□□□ 1.81
HDLBP-220ENST00000442730 PDE4DIPQ5VU43 2346 aa26.34■■□□□ 1.81
HDLBP-220ENST00000442730 PARP14Q460N5 1801 aa26.33■■□□□ 1.81
HDLBP-220ENST00000442730 SDSP20132 328 aa26.33■■□□□ 1.81
HDLBP-220ENST00000442730 ALX1Q15699 326 aa26.33■■□□□ 1.81
HDLBP-220ENST00000442730 PLEKHH3Q7Z736 793 aa26.33■■□□□ 1.81
HDLBP-220ENST00000442730 CCAR1Q8IX12 1150 aaKnown RBP26.33■■□□□ 1.81
HDLBP-220ENST00000442730 UNC93B1Q9H1C4 597 aa26.33■■□□□ 1.81
HDLBP-220ENST00000442730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.33■■□□□ 1.81
HDLBP-220ENST00000442730 CCDC171Q6TFL3 1326 aa26.33■■□□□ 1.81
HDLBP-220ENST00000442730 DSG3P32926 999 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 MORN1Q5T089 497 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 USP6NLQ92738 828 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 SHISA4Q96DD7 197 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 CEP95Q96GE4 821 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 NUDT12Q9BQG2 462 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 RNF208Q9H0X6 261 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 ANAPC4Q9UJX5 808 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 ZMYM6O95789 1325 aa26.32■■□□□ 1.8
HDLBP-220ENST00000442730 HMGCRP04035 888 aa26.31■■□□□ 1.8
HDLBP-220ENST00000442730 CTDSPL2Q05D32 466 aa26.31■■□□□ 1.8
HDLBP-220ENST00000442730 MB21D1Q8N884 522 aa26.31■■□□□ 1.8
HDLBP-220ENST00000442730 NEDD1Q8NHV4 660 aa26.31■■□□□ 1.8
HDLBP-220ENST00000442730 ATG4CQ96DT6 458 aa26.31■■□□□ 1.8
HDLBP-220ENST00000442730 MTMR4Q9NYA4 1195 aa26.31■■□□□ 1.8
HDLBP-220ENST00000442730 GJB1P08034 283 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 TSPY3P0CV98 308 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 TSPY8P0CW00 308 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 HSPD1P10809 573 aaKnown RBP26.3■■□□□ 1.8
HDLBP-220ENST00000442730 XRCC5P13010 732 aaKnown RBP26.3■■□□□ 1.8
HDLBP-220ENST00000442730 CYP2B6P20813 491 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 FAM47AQ5JRC9 791 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 FAM83BQ5T0W9 1011 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 TRIB2Q92519 343 aa26.3■■□□□ 1.8
HDLBP-220ENST00000442730 RAD21O60216 631 aa26.29■■□□□ 1.8
HDLBP-220ENST00000442730 NDUFB10O96000 172 aa26.29■■□□□ 1.8
HDLBP-220ENST00000442730 MOV10L1Q9BXT6 1211 aaKnown RBP26.29■■□□□ 1.8
HDLBP-220ENST00000442730 SPATC1LQ9H0A9 340 aa26.29■■□□□ 1.8
HDLBP-220ENST00000442730 CWC22Q9HCG8 908 aaKnown RBP26.29■■□□□ 1.8
HDLBP-220ENST00000442730 FBXO28Q9NVF7 368 aa26.29■■□□□ 1.8
HDLBP-220ENST00000442730 CLIP2Q9UDT6 1046 aa26.29■■□□□ 1.8
HDLBP-220ENST00000442730 TACC3Q9Y6A5 838 aa26.29■■□□□ 1.8
HDLBP-220ENST00000442730 TTLL1O95922 423 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 FGAP02671 866 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 RGS2P41220 211 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 GJA8P48165 433 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 TFAP4Q01664 338 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 WDR78Q5VTH9 848 aa26.28■■□□□ 1.8
HDLBP-220ENST00000442730 NKX2-3Q8TAU0 364 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms