RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 TTLL6Q8N841 843 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 PSMD1Q99460 953 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 TMEM47Q9BQJ4 181 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 DHX36Q9H2U1 1008 aaKnown RBP15.14■□□□□ 0.01
CPSF4-206ENST00000441580 SERPINB13Q9UIV8 391 aa15.14■□□□□ 0.01
CPSF4-206ENST00000441580 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 hCG_1984214I3L0E3 225 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 SMARCA1P28370 1054 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 SCNN1DP51172 638 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 AOC3Q16853 763 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 RESP18Q5W5W9 173 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 APOBEC3HQ6NTF7 200 aaKnown RBP15.13■□□□□ 0.01
CPSF4-206ENST00000441580 ZNF713Q8N859 430 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-206ENST00000441580 DAGLBQ8NCG7 672 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 CCDC12Q8WUD4 166 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-206ENST00000441580 IDI2Q9BXS1 227 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 VPS33BQ9H267 617 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
CPSF4-206ENST00000441580 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-206ENST00000441580 PARP1P09874 1014 aaKnown RBP15.12■□□□□ 0.01
CPSF4-206ENST00000441580 NDUFA8P51970 172 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 NR5A1Q13285 461 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 ZRSR1Q15695 479 aaKnown RBP15.12■□□□□ 0.01
CPSF4-206ENST00000441580 ASPRV1Q53RT3 343 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
CPSF4-206ENST00000441580 TNFRSF25Q93038 417 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 CEP95Q96GE4 821 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 CCDC17Q96LX7 622 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 DDX4Q9NQI0 724 aaKnown RBP15.12■□□□□ 0.01
CPSF4-206ENST00000441580 ANO10Q9NW15 660 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 FAM13BQ9NYF5 915 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 HPSEQ9Y251 543 aa15.12■□□□□ 0.01
CPSF4-206ENST00000441580 IGKV6D-41A0A0C4DH26 115 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 A0A1B0GVL5 298 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 MARCKSP29966 332 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-206ENST00000441580 SYKP43405 635 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 NLRP5P59047 1200 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 ANO6Q4KMQ2 910 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 CCDC125Q86Z20 511 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 KIAA0825Q8IV33 1275 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 CEP57L1Q8IYX8 460 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 MXD3Q9BW11 206 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 CCDC39Q9UFE4 941 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 ATRNL1Q5VV63 1379 aa15.11■□□□□ 0.01
CPSF4-206ENST00000441580 ARFGEF1Q9Y6D6 1849 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 PTPREP23469 700 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 TOB1P50616 345 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 NPY5RQ15761 445 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 ELOA2Q8IYF1 753 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 FERMT2Q96AC1 680 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 CCDC34Q96HJ3 373 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 NAT10Q9H0A0 1025 aaKnown RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 MTMR4Q9NYA4 1195 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 SEC63Q9UGP8 760 aaKnown RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 USP25Q9UHP3 1055 aa15.1■□□□□ 0.01
CPSF4-206ENST00000441580 HOOK1Q9UJC3 728 aaKnown RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 FBXO2Q9UK22 296 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-206ENST00000441580 ENTPD3O75355 529 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 ZNF202O95125 648 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 TTLL1O95922 423 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 SHMT1P34896 483 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 TTC38Q5R3I4 469 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 SHC4Q6S5L8 630 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 DEFB132Q7Z7B7 95 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
CPSF4-206ENST00000441580 TRIM34Q9BYJ4 488 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 TMOD2Q9NZR1 351 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
CPSF4-206ENST00000441580 hCG_1642624A0A1W2PR95 340 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 KLRF2D3W0D1 207 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 C21orf2O43822 256 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 AKR1B1P15121 316 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 ZNF165P49910 485 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 RBM5P52756 815 aaKnown RBP eCLIP15.08■□□□□ 03e-9■□□□□ 10.6
CPSF4-206ENST00000441580 PPP1R18Q6NYC8 613 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 BLIDQ8IZY5 108 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 STAG2Q8N3U4 1231 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 CBX8Q9HC52 389 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 BARHL2Q9NY43 387 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 HDAC9Q9UKV0 1011 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 PCDHB6Q9Y5E3 794 aa15.08■□□□□ 0
CPSF4-206ENST00000441580 SRPRBQ9Y5M8 271 aaKnown RBP15.08■□□□□ 0
CPSF4-206ENST00000441580 ESYT2A0FGR8 921 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 STXBP3O00186 592 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 SNHG28P0DPA3 235 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 POLD1P28340 1107 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 TGFB2P61812 414 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 NFIAQ12857 509 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 WWC2Q6AWC2 1192 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 HEATR3Q7Z4Q2 680 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 ZSCAN30Q86W11 494 aa15.07■□□□□ 0
CPSF4-206ENST00000441580 PYM1Q9BRP8 204 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms