RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 GRIPAP1Q4V328 841 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 SBK1Q52WX2 424 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 CCDC178Q5BJE1 867 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 FAM173BQ6P4H8 233 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 ZNF654Q8IZM8 581 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 RBM17Q96I25 401 aaKnown RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 USP28Q96RU2 1077 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 RNF26Q9BY78 433 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 SCAF8Q9UPN6 1271 aaKnown RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 MORC2Q9Y6X9 1032 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-209ENST00000440653 TNKSO95271 1327 aa10.56□□□□□ -0.72
HDAC6-209ENST00000440653 MYH1P12882 1939 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 TPM3P06753 285 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 LDHCP07864 332 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 PLA2G5P39877 138 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 ME1P48163 572 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 MECOMQ03112 1051 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 PDE4BQ07343 736 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 NTRK3Q16288 839 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 STX1AQ16623 288 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 ADALQ6DHV7 355 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 ADGRA1Q86SQ6 560 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 SLF2Q8IX21 1173 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 RNF214Q8ND24 703 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 DPF2Q92785 391 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 PGBD1Q96JS3 809 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 VPS33BQ9H267 617 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 ZSWIM5Q9P217 1185 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 ANKIB1Q9P2G1 1089 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
HDAC6-209ENST00000440653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC6-209ENST00000440653 MUC3AQ02505 3323 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 GOLGA6L6A8MZA4 724 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PSMD14O00487 310 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 SPTLC2O15270 562 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PRKAB2O43741 272 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PPP6R2O75170 966 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 BAG3O95817 575 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 LDHBP07195 334 aaKnown RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PLCG2P16885 1265 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 U2AF2P26368 475 aaKnown RBP eCLIP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 FOSBP53539 338 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 KIAA2012Q0VF49 1180 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 SEC23AQ15436 765 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 SF3A1Q15459 793 aaKnown RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 RRP12Q5JTH9 1297 aaKnown RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PRAMEF18Q5VWM3 479 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 KRT40Q6A162 431 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 CATIPQ7Z7H3 387 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 FAM177A1Q8N128 213 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 FSIP1Q8NA03 581 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 TBC1D22AQ8WUA7 517 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 SDR42E1Q8WUS8 393 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 EFCC1Q9HA90 598 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
HDAC6-209ENST00000440653 TFIP11Q9UBB9 837 aaKnown RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 IQSEC3Q9UPP2 1182 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-209ENST00000440653 PRUNE2Q8WUY3 3088 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 A0A1W2PPC1 479 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 RANBP6O60518 1105 aaKnown RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 NR1I2O75469 434 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 BBOX1O75936 387 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 BMP15O95972 392 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 CDC27P30260 824 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 FKBP1BP68106 108 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 GUCY1B3Q02153 619 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 IFIT1BQ5T764 474 aaKnown RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 ANO1Q5XXA6 986 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 ERO1AQ96HE7 468 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 ZSCAN10Q96SZ4 725 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 SLC26A6Q9BXS9 759 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 FOXP1Q9H334 677 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-209ENST00000440653 BRMS1Q9HCU9 246 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 KCNQ5Q9NR82 932 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 GGA1Q9UJY5 639 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 CEP131Q9UPN4 1083 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 ZKSCAN5Q9Y2L8 839 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 MROH7-TTC4A0A0A0MT08 1334 aa10.53□□□□□ -0.72
HDAC6-209ENST00000440653 MINDY4BA8MYZ0 360 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 MMP1P03956 469 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 KLRK1P26718 216 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 PRDX5P30044 214 aa10.52□□□□□ -0.73
HDAC6-209ENST00000440653 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms