RNA–Protein interactions for RNA: ENST00000438823.1

DUSP28-203, Transcript of dual specificity phosphatase 28, humanhuman

TSL 2

Gene DUSP28, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-203ENST00000438823 PARP14Q460N5 1801 aa23.56■■□□□ 1.36
DUSP28-203ENST00000438823 SLC3A2P08195 630 aaKnown RBP23.56■■□□□ 1.36
DUSP28-203ENST00000438823 CCNA1P78396 465 aa23.56■■□□□ 1.36
DUSP28-203ENST00000438823 PLEKHM2Q8IWE5 1019 aa23.56■■□□□ 1.36
DUSP28-203ENST00000438823 WDR46O15213 610 aaKnown RBP23.55■■□□□ 1.36
DUSP28-203ENST00000438823 EEF2P13639 858 aaKnown RBP23.55■■□□□ 1.36
DUSP28-203ENST00000438823 COG2Q14746 738 aa23.55■■□□□ 1.36
DUSP28-203ENST00000438823 POTEEQ6S8J3 1075 aa23.55■■□□□ 1.36
DUSP28-203ENST00000438823 HOXC10Q9NYD6 342 aa23.55■■□□□ 1.36
DUSP28-203ENST00000438823 GJD2Q9UKL4 321 aa23.55■■□□□ 1.36
DUSP28-203ENST00000438823 PLIN4Q96Q06 1357 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 SPDYE16A6NNV3 312 aaPredicted RBP23.54■■□□□ 1.36
DUSP28-203ENST00000438823 CAPN2P17655 700 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 PDE4BQ07343 736 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 CLEC10AQ8IUN9 316 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 CCAR1Q8IX12 1150 aaKnown RBP23.54■■□□□ 1.36
DUSP28-203ENST00000438823 PAGR1Q9BTK6 254 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.54■■□□□ 1.36
DUSP28-203ENST00000438823 GOPCQ9HD26 462 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 SYNPO2Q9UMS6 1093 aa23.54■■□□□ 1.36
DUSP28-203ENST00000438823 MYH4Q9Y623 1939 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 PDE4DIPQ5VU43 2346 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 TRIM6-TRIM34B2RNG4 842 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 CNMDO75829 334 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 MCMDC2Q4G0Z9 681 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 ZNF444Q8N0Y2 327 aaPredicted RBP23.53■■□□□ 1.36
DUSP28-203ENST00000438823 MB21D1Q8N884 522 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 NKX2-3Q8TAU0 364 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 TANGO6Q9C0B7 1094 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 NYAP2Q9P242 653 aa23.53■■□□□ 1.36
DUSP28-203ENST00000438823 BIN2Q9UBW5 565 aaPredicted RBP23.53■■□□□ 1.36
DUSP28-203ENST00000438823 FOXP2O15409 715 aa23.52■■□□□ 1.36
DUSP28-203ENST00000438823 XRCC5P13010 732 aaKnown RBP23.52■■□□□ 1.36
DUSP28-203ENST00000438823 EN2P19622 333 aaPredicted RBP23.52■■□□□ 1.36
DUSP28-203ENST00000438823 PPARAQ07869 468 aa23.52■■□□□ 1.36
DUSP28-203ENST00000438823 ALX1Q15699 326 aa23.52■■□□□ 1.36
DUSP28-203ENST00000438823 Q3C1V9 767 aa23.52■■□□□ 1.36
DUSP28-203ENST00000438823 NUDT12Q9BQG2 462 aa23.52■■□□□ 1.36
DUSP28-203ENST00000438823 IGKV6D-41A0A0C4DH26 115 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 INHAP05111 366 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 GJB1P08034 283 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 CCL5P13501 91 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 MTFR1Q15390 333 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 KIAA1755Q5JYT7 1200 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 GPR142Q7Z601 462 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 TRMT44Q8IYL2 757 aaKnown RBP23.51■■□□□ 1.35
DUSP28-203ENST00000438823 PORCNQ9H237 461 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 ANAPC4Q9UJX5 808 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 ZMYM6O95789 1325 aa23.51■■□□□ 1.35
DUSP28-203ENST00000438823 ZNF236Q9UL36 1845 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 A0A0D9SFI3 127 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 HMGCRP04035 888 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 ELNP15502 786 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 CCDC129Q6ZRS4 1044 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 PLEKHH3Q7Z736 793 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 RILPL2Q969X0 211 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 FAM227BQ96M60 508 aa23.5■■□□□ 1.35
DUSP28-203ENST00000438823 PEX10O60683 326 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 FLOT1O75955 427 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 MYCP01106 439 aaPredicted RBP23.49■■□□□ 1.35
DUSP28-203ENST00000438823 GJA8P48165 433 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 MFAP1P55081 439 aaKnown RBP23.49■■□□□ 1.35
DUSP28-203ENST00000438823 ATP2B2Q01814 1243 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 SPICE1Q8N0Z3 855 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 USP6NLQ92738 828 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 RNF208Q9H0X6 261 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 BTBD7Q9P203 1132 aa23.49■■□□□ 1.35
DUSP28-203ENST00000438823 HIP1O00291 1037 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 DSG3P32926 999 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 MORN1Q5T089 497 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 STK11IPQ8N1F8 1099 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 NEDD1Q8NHV4 660 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 MKL1Q969V6 931 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 MTMR4Q9NYA4 1195 aa23.48■■□□□ 1.35
DUSP28-203ENST00000438823 PRDM1O75626 825 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 TSPY3P0CV98 308 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 TSPY8P0CW00 308 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 SDSP20132 328 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 RGS2P41220 211 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 NMIQ13287 307 aaPredicted RBP23.47■■□□□ 1.35
DUSP28-203ENST00000438823 VPS53Q5VIR6 699 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 SHCBP1Q8NEM2 672 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 CWC22Q9HCG8 908 aaKnown RBP23.47■■□□□ 1.35
DUSP28-203ENST00000438823 PAK6Q9NQU5 681 aaPredicted RBP23.47■■□□□ 1.35
DUSP28-203ENST00000438823 ADAMTS5Q9UNA0 930 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 CCDC171Q6TFL3 1326 aa23.47■■□□□ 1.35
DUSP28-203ENST00000438823 COL11A1P12107 1806 aaPredicted RBP23.47■■□□□ 1.35
DUSP28-203ENST00000438823 TTLL1O95922 423 aa23.46■■□□□ 1.35
DUSP28-203ENST00000438823 CEP95Q96GE4 821 aa23.46■■□□□ 1.35
DUSP28-203ENST00000438823 APBA2Q99767 749 aa23.46■■□□□ 1.35
DUSP28-203ENST00000438823 SPATC1LQ9H0A9 340 aa23.46■■□□□ 1.35
DUSP28-203ENST00000438823 UNC93B1Q9H1C4 597 aa23.46■■□□□ 1.35
DUSP28-203ENST00000438823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.46■■□□□ 1.35
DUSP28-203ENST00000438823 IVNS1ABPQ9Y6Y0 642 aa23.46■■□□□ 1.35
DUSP28-203ENST00000438823 SLC15A5A6NIM6 579 aa23.45■■□□□ 1.34
DUSP28-203ENST00000438823 HSPD1P10809 573 aaKnown RBP23.45■■□□□ 1.34
DUSP28-203ENST00000438823 IRX6P78412 446 aaPredicted RBP23.45■■□□□ 1.34
DUSP28-203ENST00000438823 F5H6K3 240 aa23.44■■□□□ 1.34
DUSP28-203ENST00000438823 STRNO43815 780 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms