RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 TMEM179Q6ZVK1 233 aa21.48■■□□□ 1.03
MTA1-208ENST00000438610 TMEM39BQ9GZU3 492 aa21.48■■□□□ 1.03
MTA1-208ENST00000438610 GPRC5DQ9NZD1 345 aa21.48■■□□□ 1.03
MTA1-208ENST00000438610 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
MTA1-208ENST00000438610 V9GY48 417 aaPredicted RBP21.48■■□□□ 1.03
MTA1-208ENST00000438610 KRT85P78386 507 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 MAP3K10Q02779 954 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 KIF4BQ2VIQ3 1234 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 TBC1D10BQ4KMP7 808 aaPredicted RBP21.47■■□□□ 1.03
MTA1-208ENST00000438610 MKL1Q969V6 931 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 CNPY2Q9Y2B0 182 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 TCHHQ07283 1943 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 ABCB5Q2M3G0 1257 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 ATL3Q6DD88 541 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 USP48Q86UV5 1035 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 GJB4Q9NTQ9 266 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 NYAP2Q9P242 653 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 CNTNAP5Q8WYK1 1306 aa21.47■■□□□ 1.03
MTA1-208ENST00000438610 UBE2Q2LH0YL09 131 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 SMARCA1P28370 1054 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 RASA3Q14644 834 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 PKN1Q16512 942 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 STAG2Q8N3U4 1231 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 RNF181Q9P0P0 153 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 PARP1P09874 1014 aaKnown RBP21.46■■□□□ 1.03
MTA1-208ENST00000438610 XBP1P17861 261 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 FAM173BQ6P4H8 233 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 BRAPQ7Z569 592 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 CABP5Q9NP86 173 aa21.46■■□□□ 1.03
MTA1-208ENST00000438610 KIF23Q02241 960 aaPredicted RBP21.45■■□□□ 1.02
MTA1-208ENST00000438610 GPT2Q8TD30 523 aa21.45■■□□□ 1.02
MTA1-208ENST00000438610 SCAND2PQ9GZW5 306 aaPredicted RBP21.45■■□□□ 1.02
MTA1-208ENST00000438610 SNHG28P0DPA3 235 aa21.44■■□□□ 1.02
MTA1-208ENST00000438610 CFAP45Q9UL16 551 aa21.44■■□□□ 1.02
MTA1-208ENST00000438610 KLRF2D3W0D1 207 aa21.44■■□□□ 1.02
MTA1-208ENST00000438610 PDHBP11177 359 aa21.44■■□□□ 1.02
MTA1-208ENST00000438610 GDPD2Q9HCC8 539 aa21.44■■□□□ 1.02
MTA1-208ENST00000438610 HACL1Q9UJ83 578 aa21.44■■□□□ 1.02
MTA1-208ENST00000438610 SEPT2Q15019 361 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 SAFBQ15424 915 aaKnown RBP eCLIP21.43■■□□□ 1.02
MTA1-208ENST00000438610 ASPRV1Q53RT3 343 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 CLEC10AQ8IUN9 316 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 LRRC47Q8N1G4 583 aaKnown RBP21.43■■□□□ 1.02
MTA1-208ENST00000438610 ZNF396Q96N95 335 aaPredicted RBP21.43■■□□□ 1.02
MTA1-208ENST00000438610 SPZ1Q9BXG8 430 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 ISY1Q9ULR0 285 aaKnown RBP21.43■■□□□ 1.02
MTA1-208ENST00000438610 MYH6P13533 1939 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 USP17L5A8MUK1 530 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 GDF11O95390 407 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 MMP1P03956 469 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
MTA1-208ENST00000438610 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.022e-7■■□□□ 13.5
MTA1-208ENST00000438610 RRP1BQ14684 758 aaKnown RBP21.43■■□□□ 1.02
MTA1-208ENST00000438610 PFKFB3Q16875 520 aaPredicted RBP21.43■■□□□ 1.02
MTA1-208ENST00000438610 C9orf131Q5VYM1 1079 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 USP17L2Q6R6M4 530 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 TEPSINQ96N21 525 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 MTMR7Q9Y216 660 aa21.43■■□□□ 1.02
MTA1-208ENST00000438610 FIBPO43427 364 aa21.42■■□□□ 1.02
MTA1-208ENST00000438610 GH2P01242 217 aa21.42■■□□□ 1.02
MTA1-208ENST00000438610 SIAH1Q8IUQ4 282 aa21.42■■□□□ 1.02
MTA1-208ENST00000438610 SYNPO2Q9UMS6 1093 aa21.42■■□□□ 1.02
MTA1-208ENST00000438610 ELP1O95163 1332 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 SCG2P13521 617 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 ATP2B2Q01814 1243 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 ICA1Q05084 483 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 CDAN1Q8IWY9 1227 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 TFIP11Q9UBB9 837 aaKnown RBP21.41■■□□□ 1.02
MTA1-208ENST00000438610 UTRNP46939 3433 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 UBE2HP62256 183 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 SHROOM1Q2M3G4 852 aaPredicted RBP21.41■■□□□ 1.02
MTA1-208ENST00000438610 CAVIN1Q6NZI2 390 aaKnown RBP21.41■■□□□ 1.02
MTA1-208ENST00000438610 APOBEC3FQ8IUX4 373 aaKnown RBP21.41■■□□□ 1.02
MTA1-208ENST00000438610 DEFB129Q9H1M3 183 aa21.41■■□□□ 1.02
MTA1-208ENST00000438610 ASTN2O75129 1339 aaPredicted RBP21.4■■□□□ 1.02
MTA1-208ENST00000438610 hCG_1642624A0A1W2PR95 340 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 KIF28PB7ZC32 967 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 CYTH3O43739 400 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 DDNO94850 711 aaPredicted RBP21.4■■□□□ 1.02
MTA1-208ENST00000438610 GOLGA8HP0CJ92 632 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 EPS15P42566 896 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 JAG1P78504 1218 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 SLC35G1Q2M3R5 365 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 FOXP1Q9H334 677 aaPredicted RBP21.4■■□□□ 1.02
MTA1-208ENST00000438610 BAZ2BQ9UIF8 2168 aaKnown RBP21.4■■□□□ 1.02
MTA1-208ENST00000438610 GOLGA6L3A6NEY3 463 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 GPATCH4Q5T3I0 446 aaKnown RBP21.4■■□□□ 1.02
MTA1-208ENST00000438610 MIGA2Q7L4E1 593 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 FAM177A1Q8N128 213 aaPredicted RBP21.4■■□□□ 1.02
MTA1-208ENST00000438610 PHF20Q9BVI0 1012 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 SH3GLB2Q9NR46 395 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 KCNJ14Q9UNX9 436 aa21.4■■□□□ 1.02
MTA1-208ENST00000438610 MYH4Q9Y623 1939 aa21.39■■□□□ 1.02
MTA1-208ENST00000438610 ZNF543Q08ER8 600 aa21.39■■□□□ 1.01
MTA1-208ENST00000438610 GNL2Q13823 731 aaKnown RBP21.39■■□□□ 1.01
MTA1-208ENST00000438610 L1TD1Q5T7N2 865 aaKnown RBP21.39■■□□□ 1.01
MTA1-208ENST00000438610 MYSM1Q5VVJ2 828 aa21.39■■□□□ 1.01
MTA1-208ENST00000438610 LEO1Q8WVC0 666 aaPredicted RBP21.39■■□□□ 1.01
MTA1-208ENST00000438610 SPATA32Q96LK8 384 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms