RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
PTPN7-203ENST00000435759 USP17L21D6R901 530 aa16.48■□□□□ 0.23
PTPN7-203ENST00000435759 TRMT44Q8IYL2 757 aaKnown RBP16.48■□□□□ 0.23
PTPN7-203ENST00000435759 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
PTPN7-203ENST00000435759 APBA2Q99767 749 aa16.48■□□□□ 0.23
PTPN7-203ENST00000435759 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
PTPN7-203ENST00000435759 COL6A1P12109 1028 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 CYP2C19P33261 490 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 CDK8P49336 464 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 CCNA1P78396 465 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 C12orf60Q5U649 245 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 SPICE1Q8N0Z3 855 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 LRCH3Q96II8 777 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 GDF15Q99988 308 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
PTPN7-203ENST00000435759 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 HOXC10Q9NYD6 342 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 MYH1P12882 1939 aa16.47■□□□□ 0.23
PTPN7-203ENST00000435759 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
PTPN7-203ENST00000435759 IGHA2P01877 340 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 GRB14Q14449 540 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 CTR9Q6PD62 1173 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 TMEM179Q6ZVK1 233 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 LRRCC1Q9C099 1032 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.23
PTPN7-203ENST00000435759 COBLO75128 1261 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 HOXC6P09630 235 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 DSG3P32926 999 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 LRRC26Q2I0M4 334 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-203ENST00000435759 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
PTPN7-203ENST00000435759 EEF2P13639 858 aaKnown RBP16.44■□□□□ 0.22
PTPN7-203ENST00000435759 ERCC3P19447 782 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 CNGA1P29973 690 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 PRAMEF19Q5SWL8 479 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 MFSD14CQ5VZR4 134 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
PTPN7-203ENST00000435759 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.226e-7■■■■□ 19.6
PTPN7-203ENST00000435759 SPATC1LQ9H0A9 340 aa16.44■□□□□ 0.22
PTPN7-203ENST00000435759 ADORA2AP29274 412 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 BMP8BP34820 402 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 MAGEA10P43363 369 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-203ENST00000435759 C16orf86Q6ZW13 317 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 DPP9Q86TI2 863 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
PTPN7-203ENST00000435759 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-203ENST00000435759 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
PTPN7-203ENST00000435759 VCPKMTQ9H867 229 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 FBXO28Q9NVF7 368 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 IVNS1ABPQ9Y6Y0 642 aa16.43■□□□□ 0.22
PTPN7-203ENST00000435759 FLOT1O75955 427 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 ICA1Q05084 483 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 PLS1Q14651 629 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 TMEM132BQ14DG7 1078 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 ANO1Q5XXA6 986 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 CCDC17Q96LX7 622 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 ECHDC1Q9NTX5 307 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 DDX20Q9UHI6 824 aaKnown RBP16.42■□□□□ 0.22
PTPN7-203ENST00000435759 A0A0C4DFX4 3053 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 COL6A3P12111 3177 aa16.42■□□□□ 0.22
PTPN7-203ENST00000435759 GSG1L2A8MUP6 293 aa16.41■□□□□ 0.22
PTPN7-203ENST00000435759 STRNO43815 780 aa16.41■□□□□ 0.22
PTPN7-203ENST00000435759 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
PTPN7-203ENST00000435759 ARHGEF10LQ9HCE6 1279 aa16.41■□□□□ 0.22
PTPN7-203ENST00000435759 A0A1W2PPC1 479 aa16.4■□□□□ 0.22
PTPN7-203ENST00000435759 ATN1P54259 1190 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-203ENST00000435759 GJC2Q5T442 439 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-203ENST00000435759 SHCBP1Q8NEM2 672 aa16.4■□□□□ 0.22
PTPN7-203ENST00000435759 LPAR1Q92633 364 aa16.4■□□□□ 0.22
PTPN7-203ENST00000435759 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
PTPN7-203ENST00000435759 ADAMTS5Q9UNA0 930 aa16.4■□□□□ 0.22
PTPN7-203ENST00000435759 LAMA2P24043 3122 aaKnown RBP16.4■□□□□ 0.22
PTPN7-203ENST00000435759 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
PTPN7-203ENST00000435759 CYBAP13498 195 aa16.39■□□□□ 0.21
PTPN7-203ENST00000435759 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-203ENST00000435759 ZSCAN25Q6NSZ9 544 aa16.39■□□□□ 0.21
PTPN7-203ENST00000435759 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-203ENST00000435759 PCDHB15Q9Y5E8 787 aa16.39■□□□□ 0.21
PTPN7-203ENST00000435759 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
PTPN7-203ENST00000435759 MINDY4BA8MYZ0 360 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
PTPN7-203ENST00000435759 PGK2P07205 417 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 RASA1P20936 1047 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 SBK1Q52WX2 424 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 OLFML2BQ68BL8 750 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 KBTBD3Q8NAB2 608 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 OTUD7AQ8TE49 926 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-203ENST00000435759 UBE2OQ9C0C9 1292 aaKnown RBP16.38■□□□□ 0.21
PTPN7-203ENST00000435759 MROH8Q9H579 483 aa16.38■□□□□ 0.21
PTPN7-203ENST00000435759 M0R2C6 588 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms