RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 VEZTQ9HBM0 779 aa13.83□□□□□ -0.19
CLDN4-203ENST00000435050 TCP11L1Q9NUJ3 509 aa13.83□□□□□ -0.19
CLDN4-203ENST00000435050 LRP6O75581 1613 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 BMP15O95972 392 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 CHRNA5P30532 468 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 AXDND1Q5T1B0 1012 aaPredicted RBP13.83□□□□□ -0.2
CLDN4-203ENST00000435050 ZNF384Q8TF68 577 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 CCDC12Q8WUD4 166 aaPredicted RBP13.83□□□□□ -0.2
CLDN4-203ENST00000435050 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 FANCLQ9NW38 375 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 NFE2L3Q9Y4A8 694 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 STK36Q9NRP7 1315 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 CCNT1O60563 726 aaKnown RBP13.83□□□□□ -0.2
CLDN4-203ENST00000435050 IDEP14735 1019 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 TROAPQ12815 778 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 SEC23AQ15436 765 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 PTPN14Q15678 1187 aa13.83□□□□□ -0.2
CLDN4-203ENST00000435050 SMCO2A6NFE2 343 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 ZNF500O60304 480 aaPredicted RBP13.82□□□□□ -0.2
CLDN4-203ENST00000435050 U2AF2P26368 475 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLDN4-203ENST00000435050 RXRBP28702 533 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 TM4SF1P30408 202 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 SLC16A2P36021 539 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 RBM26Q5T8P6 1007 aaKnown RBP13.82□□□□□ -0.2
CLDN4-203ENST00000435050 PPFIBP1Q86W92 1011 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
CLDN4-203ENST00000435050 FBXL16Q8N461 479 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 CACTINQ8WUQ7 758 aaKnown RBP13.82□□□□□ -0.2
CLDN4-203ENST00000435050 GOLGA8FQ08AF8 430 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 GOLGA8DPQ0D2H9 430 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 IQUBQ8NA54 791 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 N4BP2Q86UW6 1770 aaPredicted RBP13.82□□□□□ -0.2
CLDN4-203ENST00000435050 ITGB4P16144 1822 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 STK32BQ9NY57 414 aa13.82□□□□□ -0.2
CLDN4-203ENST00000435050 PPIP5K2O43314 1243 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 TXKP42681 527 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 ORC4O43929 436 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 VEGFAP15692 232 aaPredicted RBP13.81□□□□□ -0.2
CLDN4-203ENST00000435050 PIGSQ96S52 555 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 ANAPC4Q9UJX5 808 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 PTPREP23469 700 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 ZYXQ15942 572 aaKnown RBP13.81□□□□□ -0.2
CLDN4-203ENST00000435050 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 COA7Q96BR5 231 aa13.81□□□□□ -0.2
CLDN4-203ENST00000435050 NPR1P16066 1061 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 CCDC144BQ3MJ40 725 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 AHDC1Q5TGY3 1603 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 KRT18P05783 430 aaKnown RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 GSDMDP57764 484 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 RBM6P78332 1123 aaKnown RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 EARS2Q5JPH6 523 aaKnown RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 KCTD1Q719H9 257 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 DAGLAQ9Y4D2 1042 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 GNA11P29992 359 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-203ENST00000435050 IQCB1Q15051 598 aa13.8□□□□□ -0.2
CLDN4-203ENST00000435050 SLURP2P0DP57 97 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 STIM1Q13586 685 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 TRMT1LQ7Z2T5 733 aaKnown RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 COA1Q9GZY4 146 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 MAGEC2Q9UBF1 373 aaPredicted RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 SERPINB13Q9UIV8 391 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 NUP98P52948 1817 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 USP17L5A8MUK1 530 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 PTPAQ15257 358 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 SRPRBQ9Y5M8 271 aaKnown RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 CLRN2A0PK11 232 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 HMGB2P26583 209 aaKnown RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 ZNF772Q68DY9 489 aaPredicted RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 DHX40Q8IX18 779 aaKnown RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 FERMT2Q96AC1 680 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 FLT1P17948 1338 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 C21orf2O43822 256 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 GDF11O95390 407 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 ZNF76P36508 570 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 ASIC1P78348 528 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 METTL16Q86W50 562 aaKnown RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
CLDN4-203ENST00000435050 MAN1B1Q9UKM7 699 aa13.79□□□□□ -0.2
CLDN4-203ENST00000435050 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 N4BP3O15049 544 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 ERCC3P19447 782 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 PFKFB3Q16875 520 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 MASTLQ96GX5 879 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 FBXO2Q9UK22 296 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-203ENST00000435050 ATRNO75882 1429 aa13.78□□□□□ -0.2
CLDN4-203ENST00000435050 RASA1P20936 1047 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms