RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 KIF23Q02241 960 aaPredicted RBP12.25□□□□□ -0.45
NEFM-202ENST00000433454 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
NEFM-202ENST00000433454 LZTS2Q9BRK4 669 aa12.25□□□□□ -0.45
NEFM-202ENST00000433454 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
NEFM-202ENST00000433454 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
NEFM-202ENST00000433454 MYH4Q9Y623 1939 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 MBD3O95983 291 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 PARP1P09874 1014 aaKnown RBP12.24□□□□□ -0.45
NEFM-202ENST00000433454 GNL2Q13823 731 aaKnown RBP12.24□□□□□ -0.45
NEFM-202ENST00000433454 RBM26Q5T8P6 1007 aaKnown RBP12.24□□□□□ -0.45
NEFM-202ENST00000433454 ATL3Q6DD88 541 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 TMEM179Q6ZVK1 233 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 CLEC10AQ8IUN9 316 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 GPC2Q8N158 579 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 TMEM39BQ9GZU3 492 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEFM-202ENST00000433454 CFAP45Q9UL16 551 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 PALM3A6NDB9 673 aaPredicted RBP12.24□□□□□ -0.45
NEFM-202ENST00000433454 EGFRP00533 1210 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 SAFBQ15424 915 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEFM-202ENST00000433454 ABCB5Q2M3G0 1257 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
NEFM-202ENST00000433454 STAG2Q8N3U4 1231 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 ZNF396Q96N95 335 aaPredicted RBP12.24□□□□□ -0.45
NEFM-202ENST00000433454 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 CLIP2Q9UDT6 1046 aa12.24□□□□□ -0.45
NEFM-202ENST00000433454 BAZ2BQ9UIF8 2168 aaKnown RBP12.23□□□□□ -0.45
NEFM-202ENST00000433454 ELP1O95163 1332 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 H7C1D1 291 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 MMP1P03956 469 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
NEFM-202ENST00000433454 PKN1Q16512 942 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
NEFM-202ENST00000433454 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 SPATA32Q96LK8 384 aa12.23□□□□□ -0.45
NEFM-202ENST00000433454 GDF11O95390 407 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 ATP2B2Q01814 1243 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 KIF28PB7ZC32 967 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 KLRF2D3W0D1 207 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 TBC1D12O60347 775 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 PDHBP11177 359 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 SCG2P13521 617 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 UBE2HP62256 183 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 ICA1Q05084 483 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 GPRC5DQ9NZD1 345 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 RNF181Q9P0P0 153 aa12.22□□□□□ -0.45
NEFM-202ENST00000433454 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
NEFM-202ENST00000433454 USP17L5A8MUK1 530 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 GOLGA8HP0CJ92 632 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 SNHG28P0DPA3 235 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEFM-202ENST00000433454 RASA3Q14644 834 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 PFKFB3Q16875 520 aaPredicted RBP12.21□□□□□ -0.45
NEFM-202ENST00000433454 USP17L2Q6R6M4 530 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 RASGRP2Q7LDG7 609 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.45
NEFM-202ENST00000433454 SPZ1Q9BXG8 430 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 KCNJ14Q9UNX9 436 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 GADD45BO75293 160 aaPredicted RBP12.21□□□□□ -0.45
NEFM-202ENST00000433454 GH2P01242 217 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
NEFM-202ENST00000433454 SEPT2Q15019 361 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 SHROOM1Q2M3G4 852 aaPredicted RBP12.21□□□□□ -0.45
NEFM-202ENST00000433454 MYSM1Q5VVJ2 828 aa12.21□□□□□ -0.45
NEFM-202ENST00000433454 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.45
NEFM-202ENST00000433454 SMARCA1P28370 1054 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 MKL1Q969V6 931 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 GZF1Q9H116 711 aaPredicted RBP12.2□□□□□ -0.46
NEFM-202ENST00000433454 FOXP1Q9H334 677 aaPredicted RBP12.2□□□□□ -0.46
NEFM-202ENST00000433454 HACL1Q9UJ83 578 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 CYTH3O43739 400 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 BRMS1Q9HCU9 246 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
NEFM-202ENST00000433454 CEBPZQ03701 1054 aaKnown RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 ZNF543Q08ER8 600 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 ASTN2O75129 1339 aaPredicted RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 FRMPD2Q68DX3 1309 aaPredicted RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 BTBD18B2RXH4 712 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 KRT2P35908 639 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 MAP3K10Q02779 954 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 RRP1BQ14684 758 aaKnown RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 SLC35G1Q2M3R5 365 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 CAVIN1Q6NZI2 390 aaKnown RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 MIGA2Q7L4E1 593 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 APOBEC3FQ8IUX4 373 aaKnown RBP12.19□□□□□ -0.46
NEFM-202ENST00000433454 TRPM4Q8TD43 1214 aa12.19□□□□□ -0.46
NEFM-202ENST00000433454 RRP36Q96EU6 259 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms