RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 UBE2HP62256 183 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 TROAPQ12815 778 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 NUP62CLQ9H1M0 184 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-205ENST00000431183 MBD3O95983 291 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 RASA3Q14644 834 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 SEC23AQ15436 765 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 FCHSD1Q86WN1 690 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 GJA10Q969M2 543 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 KIFC2Q96AC6 838 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 LLPHQ9BRT6 129 aaKnown RBP12.97□□□□□ -0.33
SMPD4-205ENST00000431183 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 PCDHB6Q9Y5E3 794 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 SPTLC2O15270 562 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 DEXIO95424 95 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-205ENST00000431183 KIF23Q02241 960 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-205ENST00000431183 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 RCSD1Q6JBY9 416 aa12.97□□□□□ -0.33
SMPD4-205ENST00000431183 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 PDE4CQ08493 712 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 EARS2Q5JPH6 523 aaKnown RBP12.96□□□□□ -0.33
SMPD4-205ENST00000431183 C7orf43Q8WVR3 580 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 PKD2L1Q9P0L9 805 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 AFMP43652 599 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 INF2Q27J81 1249 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 ACER1Q8TDN7 264 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-205ENST00000431183 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
SMPD4-205ENST00000431183 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 RGL2O15211 777 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 EPS15P42566 896 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 PPP4CP60510 307 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 GRIN1Q05586 938 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 UBE2SQ16763 222 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 SPC24Q8NBT2 197 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.34
SMPD4-205ENST00000431183 RBSNQ9H1K0 784 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 PI4KBQ9UBF8 816 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 C4AP0C0L4 1744 aa12.96□□□□□ -0.34
SMPD4-205ENST00000431183 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 WNT10BO00744 389 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 IFNAR1P17181 557 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 NTRK3Q16288 839 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 ZSCAN16Q9H4T2 348 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-205ENST00000431183 PCDHA7Q9UN72 937 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 COBLO75128 1261 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 CASP1P29466 404 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 ANGEL2Q5VTE6 544 aaKnown RBP12.95□□□□□ -0.34
SMPD4-205ENST00000431183 ANO1Q5XXA6 986 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 SH3BP5LQ7L8J4 393 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 ZSCAN30Q86W11 494 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-205ENST00000431183 WASF1Q92558 559 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
SMPD4-205ENST00000431183 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMPD4-205ENST00000431183 SORBS3O60504 671 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SLFN13Q68D06 897 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-205ENST00000431183 MYOZ2Q9NPC6 264 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 CTDP1Q9Y5B0 961 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-205ENST00000431183 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 H7C1D1 291 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SCG2P13521 617 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 JAG1P78504 1218 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 PTPN21Q16825 1174 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SASS6Q6UVJ0 657 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 ZKSCAN4Q969J2 545 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-205ENST00000431183 AGXT2Q9BYV1 514 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 TCHHQ07283 1943 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SSBP05455 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 SHMT1P34896 483 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 KRT2P35908 639 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 WDR78Q5VTH9 848 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 USP49Q70CQ1 688 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMPD4-205ENST00000431183 TSPY26PQ9H489 355 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 FBXO28Q9NVF7 368 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 USP25Q9UHP3 1055 aa12.94□□□□□ -0.34
SMPD4-205ENST00000431183 CCDC173Q0VFZ6 552 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 KLHL10Q6JEL2 608 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 SLC30A10Q6XR72 485 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
SMPD4-205ENST00000431183 RRP36Q96EU6 259 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms