RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
HOXC4-202ENST00000430889 ADAMTS3O15072 1205 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 LRRC8AQ8IWT6 810 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 TBC1D22AQ8WUA7 517 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 SH3GLB2Q9NR46 395 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 MAD2L2Q9UI95 211 aa15.99■□□□□ 0.15
HOXC4-202ENST00000430889 A0A087X0B3 334 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 M0R2N6 131 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 POLR2DO15514 142 aaKnown RBP15.98■□□□□ 0.15
HOXC4-202ENST00000430889 NEMFO60524 1076 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 PRR29P0C7W0 189 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 PLCG2P16885 1265 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 TRAPPC10P48553 1259 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
HOXC4-202ENST00000430889 POSTNQ15063 836 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 SH3RF1Q7Z6J0 888 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 MAPKAPK5Q8IW41 473 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 FERMT2Q96AC1 680 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 AKT1S1Q96B36 256 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 BRMS1Q9HCU9 246 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 SERTAD1Q9UHV2 236 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 FLT1P17948 1338 aa15.98■□□□□ 0.15
HOXC4-202ENST00000430889 MYH8P13535 1937 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 USP17L3A6NCW0 530 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 USP17L4A6NCW7 530 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
HOXC4-202ENST00000430889 ZNF827Q17R98 1081 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 SLC4A8Q2Y0W8 1093 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 TTC38Q5R3I4 469 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 MFSD14BQ5SR56 506 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 USP17L1Q7RTZ2 530 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 STAG2Q8N3U4 1231 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 IMPACTQ9P2X3 320 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 ATP6V0A2Q9Y487 856 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 GREB1LQ9C091 1923 aaPredicted RBP15.97■□□□□ 0.15
HOXC4-202ENST00000430889 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
HOXC4-202ENST00000430889 PALM3A6NDB9 673 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-202ENST00000430889 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-202ENST00000430889 MYO1BO43795 1136 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 CCZ1BP86790 482 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 CCZ1P86791 482 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-202ENST00000430889 MYL5Q02045 173 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 MORC3Q14149 939 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 ARID5BQ14865 1188 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 AMOTL1Q8IY63 956 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 FAM177A1Q8N128 213 aaPredicted RBP15.96■□□□□ 0.15
HOXC4-202ENST00000430889 PRIMPOLQ96LW4 560 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
HOXC4-202ENST00000430889 PLIN4Q96Q06 1357 aa15.96■□□□□ 0.15
HOXC4-202ENST00000430889 RGPD3A6NKT7 1758 aaPredicted RBP15.95■□□□□ 0.14
HOXC4-202ENST00000430889 RGPD4Q7Z3J3 1758 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 CYTH3O43739 400 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 ATP2B1P20020 1258 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 CDK8P49336 464 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 GNAQP50148 359 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TYW1BQ6NUM6 668 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 KANK3Q6NY19 840 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TEX11Q8IYF3 940 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TRIML1Q8N9V2 468 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 DAGLBQ8NCG7 672 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 NEDD1Q8NHV4 660 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TMEM47Q9BQJ4 181 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 MKNK2Q9HBH9 465 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 KCND1Q9NSA2 647 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 IFNKQ9P0W0 207 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
HOXC4-202ENST00000430889 HOOK1Q9UJC3 728 aaKnown RBP15.95■□□□□ 0.14
HOXC4-202ENST00000430889 PLSCR1O15162 318 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TSPY3P0CV98 308 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TSPY8P0CW00 308 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 SRGNP10124 158 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 CALML3P27482 149 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 FANCCQ00597 558 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
HOXC4-202ENST00000430889 C4orf32Q8N8J7 132 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 COA1Q9GZY4 146 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 SUGT1Q9Y2Z0 365 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 DAGLAQ9Y4D2 1042 aa15.95■□□□□ 0.14
HOXC4-202ENST00000430889 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
HOXC4-202ENST00000430889 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 UQCRHLA0A096LP55 91 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 UQCRHP07919 91 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 ATP1A3P13637 1013 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 GSDMDP57764 484 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 NLRP5P59047 1200 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 TPM4P67936 248 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 ZNF174Q15697 407 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 EPSTI1Q96J88 318 aa15.94■□□□□ 0.14
HOXC4-202ENST00000430889 SLFN14P0C7P3 912 aa15.93■□□□□ 0.14
HOXC4-202ENST00000430889 GTF2F1P35269 517 aaKnown RBP eCLIP15.93■□□□□ 0.14
HOXC4-202ENST00000430889 PTGDRQ13258 359 aa15.93■□□□□ 0.14
HOXC4-202ENST00000430889 IL17AQ16552 155 aa15.93■□□□□ 0.14
HOXC4-202ENST00000430889 COL23A1Q86Y22 540 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms